Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.82■□□□□ 0.76
CiitaP79621 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.82■□□□□ 0.76
CiitaP79621 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CiitaP79621 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CiitaP79621 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CiitaP79621 Mtag2-201ENSMUST00000058665 714 ntBASIC19.82■□□□□ 0.76
CiitaP79621 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CiitaP79621 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CiitaP79621 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CiitaP79621 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CiitaP79621 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CiitaP79621 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CiitaP79621 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CiitaP79621 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CiitaP79621 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.81■□□□□ 0.76
CiitaP79621 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CiitaP79621 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CiitaP79621 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.81■□□□□ 0.76
CiitaP79621 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CiitaP79621 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CiitaP79621 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CiitaP79621 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CiitaP79621 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CiitaP79621 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CiitaP79621 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.8■□□□□ 0.76
CiitaP79621 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CiitaP79621 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.8■□□□□ 0.76
CiitaP79621 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CiitaP79621 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.8■□□□□ 0.76
CiitaP79621 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CiitaP79621 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CiitaP79621 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CiitaP79621 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CiitaP79621 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CiitaP79621 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CiitaP79621 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CiitaP79621 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.8■□□□□ 0.76
CiitaP79621 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.79■□□□□ 0.76
CiitaP79621 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CiitaP79621 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CiitaP79621 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CiitaP79621 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.79■□□□□ 0.76
CiitaP79621 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CiitaP79621 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CiitaP79621 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CiitaP79621 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CiitaP79621 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CiitaP79621 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CiitaP79621 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.79■□□□□ 0.76
CiitaP79621 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CiitaP79621 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CiitaP79621 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CiitaP79621 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CiitaP79621 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CiitaP79621 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CiitaP79621 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CiitaP79621 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.78■□□□□ 0.76
CiitaP79621 Gm10252-201ENSMUST00000209541 832 ntBASIC19.78■□□□□ 0.76
CiitaP79621 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.78■□□□□ 0.76
CiitaP79621 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CiitaP79621 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CiitaP79621 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CiitaP79621 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CiitaP79621 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CiitaP79621 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.77■□□□□ 0.76
CiitaP79621 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.77■□□□□ 0.76
CiitaP79621 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CiitaP79621 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CiitaP79621 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CiitaP79621 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.77■□□□□ 0.76
CiitaP79621 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CiitaP79621 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.77■□□□□ 0.76
CiitaP79621 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CiitaP79621 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.77■□□□□ 0.76
CiitaP79621 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CiitaP79621 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.77■□□□□ 0.76
CiitaP79621 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CiitaP79621 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CiitaP79621 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CiitaP79621 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CiitaP79621 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.76■□□□□ 0.75
CiitaP79621 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CiitaP79621 Gm15378-201ENSMUST00000121894 207 ntBASIC19.76■□□□□ 0.75
CiitaP79621 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CiitaP79621 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CiitaP79621 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CiitaP79621 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CiitaP79621 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CiitaP79621 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CiitaP79621 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CiitaP79621 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CiitaP79621 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CiitaP79621 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CiitaP79621 Gm10138-203ENSMUST00000206952 366 ntBASIC19.75■□□□□ 0.75
CiitaP79621 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CiitaP79621 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CiitaP79621 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CiitaP79621 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CiitaP79621 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CiitaP79621 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms