Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crnkl1P63154 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crnkl1P63154 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crnkl1P63154 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Crnkl1P63154 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crnkl1P63154 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.06■□□□□ 0.48
Crnkl1P63154 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.06■□□□□ 0.48
Crnkl1P63154 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Crnkl1P63154 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crnkl1P63154 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.06■□□□□ 0.48
Crnkl1P63154 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Crnkl1P63154 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crnkl1P63154 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Crnkl1P63154 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Crnkl1P63154 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Crnkl1P63154 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Crnkl1P63154 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Crnkl1P63154 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Crnkl1P63154 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Crnkl1P63154 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.05■□□□□ 0.48
Crnkl1P63154 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.05■□□□□ 0.48
Crnkl1P63154 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Crnkl1P63154 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Crnkl1P63154 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Crnkl1P63154 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Crnkl1P63154 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Crnkl1P63154 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Crnkl1P63154 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crnkl1P63154 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crnkl1P63154 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crnkl1P63154 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Crnkl1P63154 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Crnkl1P63154 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crnkl1P63154 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crnkl1P63154 Gm45417-201ENSMUST00000209533 758 ntBASIC18.04■□□□□ 0.48
Crnkl1P63154 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Crnkl1P63154 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crnkl1P63154 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Crnkl1P63154 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Crnkl1P63154 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crnkl1P63154 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crnkl1P63154 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.04■□□□□ 0.48
Crnkl1P63154 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Crnkl1P63154 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Crnkl1P63154 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.03■□□□□ 0.48
Crnkl1P63154 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.03■□□□□ 0.48
Crnkl1P63154 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.03■□□□□ 0.48
Crnkl1P63154 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.03■□□□□ 0.48
Crnkl1P63154 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crnkl1P63154 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crnkl1P63154 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crnkl1P63154 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crnkl1P63154 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crnkl1P63154 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crnkl1P63154 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.02■□□□□ 0.48
Crnkl1P63154 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Crnkl1P63154 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crnkl1P63154 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crnkl1P63154 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Crnkl1P63154 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Crnkl1P63154 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Crnkl1P63154 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.01■□□□□ 0.47
Crnkl1P63154 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Crnkl1P63154 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.01■□□□□ 0.47
Crnkl1P63154 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.01■□□□□ 0.47
Crnkl1P63154 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Crnkl1P63154 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Crnkl1P63154 Gm15039-201ENSMUST00000118914 875 ntBASIC18■□□□□ 0.47
Crnkl1P63154 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms