Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rpl39P62892 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Gm9959-201ENSMUST00000068277 390 ntBASIC13.03□□□□□ -0.32
Rpl39P62892 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rpl39P62892 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rpl39P62892 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.02□□□□□ -0.32
Rpl39P62892 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpl39P62892 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.02□□□□□ -0.32
Rpl39P62892 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpl39P62892 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpl39P62892 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rpl39P62892 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpl39P62892 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpl39P62892 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpl39P62892 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpl39P62892 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpl39P62892 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpl39P62892 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpl39P62892 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpl39P62892 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpl39P62892 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpl39P62892 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Rpl39P62892 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.01□□□□□ -0.33
Rpl39P62892 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpl39P62892 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13□□□□□ -0.33
Rpl39P62892 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rpl39P62892 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rpl39P62892 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Rpl39P62892 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rpl39P62892 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13□□□□□ -0.33
Rpl39P62892 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpl39P62892 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rpl39P62892 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rpl39P62892 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.99□□□□□ -0.33
Rpl39P62892 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Gm7860-201ENSMUST00000121190 879 ntBASIC12.99□□□□□ -0.33
Rpl39P62892 Gm15546-201ENSMUST00000122095 826 ntBASIC12.99□□□□□ -0.33
Rpl39P62892 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rpl39P62892 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.99□□□□□ -0.33
Rpl39P62892 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpl39P62892 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Rpl39P62892 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rpl39P62892 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rpl39P62892 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.98□□□□□ -0.33
Rpl39P62892 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Rpl39P62892 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpl39P62892 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms