Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SmoP56726 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SmoP56726 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.38■□□□□ 0.53
SmoP56726 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SmoP56726 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SmoP56726 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.38■□□□□ 0.53
SmoP56726 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SmoP56726 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SmoP56726 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SmoP56726 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SmoP56726 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.37■□□□□ 0.53
SmoP56726 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SmoP56726 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SmoP56726 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SmoP56726 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SmoP56726 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SmoP56726 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SmoP56726 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SmoP56726 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SmoP56726 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SmoP56726 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SmoP56726 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SmoP56726 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SmoP56726 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SmoP56726 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SmoP56726 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SmoP56726 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.36■□□□□ 0.53
SmoP56726 Gm38285-201ENSMUST00000192928 922 ntBASIC18.36■□□□□ 0.53
SmoP56726 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SmoP56726 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SmoP56726 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SmoP56726 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SmoP56726 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SmoP56726 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SmoP56726 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SmoP56726 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SmoP56726 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SmoP56726 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SmoP56726 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.35■□□□□ 0.53
SmoP56726 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SmoP56726 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.35■□□□□ 0.53
SmoP56726 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SmoP56726 Mtag2-201ENSMUST00000058665 714 ntBASIC18.35■□□□□ 0.53
SmoP56726 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SmoP56726 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.35■□□□□ 0.53
SmoP56726 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SmoP56726 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SmoP56726 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SmoP56726 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.35■□□□□ 0.53
SmoP56726 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SmoP56726 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.34■□□□□ 0.53
SmoP56726 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 Gm13158-201ENSMUST00000122007 736 ntBASIC18.34■□□□□ 0.53
SmoP56726 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.34■□□□□ 0.53
SmoP56726 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.34■□□□□ 0.53
SmoP56726 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SmoP56726 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SmoP56726 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SmoP56726 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SmoP56726 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SmoP56726 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.33■□□□□ 0.53
SmoP56726 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SmoP56726 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SmoP56726 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SmoP56726 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.33■□□□□ 0.52
SmoP56726 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SmoP56726 Gm18666-201ENSMUST00000190039 958 ntBASIC18.33■□□□□ 0.52
SmoP56726 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.33■□□□□ 0.52
SmoP56726 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SmoP56726 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SmoP56726 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.33■□□□□ 0.52
SmoP56726 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmoP56726 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmoP56726 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SmoP56726 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmoP56726 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmoP56726 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.32■□□□□ 0.52
SmoP56726 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmoP56726 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmoP56726 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmoP56726 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.32■□□□□ 0.52
SmoP56726 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.32■□□□□ 0.52
SmoP56726 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SmoP56726 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmoP56726 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SmoP56726 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SmoP56726 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.32■□□□□ 0.52
SmoP56726 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SmoP56726 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SmoP56726 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmoP56726 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms