Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hnf4aP49698 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hnf4aP49698 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hnf4aP49698 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hnf4aP49698 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hnf4aP49698 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hnf4aP49698 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.68■□□□□ 0.42
Hnf4aP49698 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hnf4aP49698 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hnf4aP49698 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hnf4aP49698 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hnf4aP49698 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.67■□□□□ 0.42
Hnf4aP49698 AV356131-201ENSMUST00000206201 750 ntBASIC17.67■□□□□ 0.42
Hnf4aP49698 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.67■□□□□ 0.42
Hnf4aP49698 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hnf4aP49698 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.67■□□□□ 0.42
Hnf4aP49698 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hnf4aP49698 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hnf4aP49698 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hnf4aP49698 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hnf4aP49698 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hnf4aP49698 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hnf4aP49698 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Hnf4aP49698 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hnf4aP49698 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hnf4aP49698 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hnf4aP49698 Nespas-201ENSMUST00000143738 1083 ntBASIC17.66■□□□□ 0.42
Hnf4aP49698 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.66■□□□□ 0.42
Hnf4aP49698 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.66■□□□□ 0.42
Hnf4aP49698 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hnf4aP49698 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hnf4aP49698 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hnf4aP49698 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hnf4aP49698 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hnf4aP49698 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hnf4aP49698 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hnf4aP49698 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hnf4aP49698 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hnf4aP49698 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.65■□□□□ 0.42
Hnf4aP49698 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hnf4aP49698 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hnf4aP49698 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hnf4aP49698 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hnf4aP49698 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.65■□□□□ 0.42
Hnf4aP49698 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hnf4aP49698 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hnf4aP49698 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hnf4aP49698 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.64■□□□□ 0.41
Hnf4aP49698 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hnf4aP49698 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hnf4aP49698 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hnf4aP49698 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hnf4aP49698 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hnf4aP49698 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.64■□□□□ 0.41
Hnf4aP49698 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hnf4aP49698 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hnf4aP49698 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hnf4aP49698 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hnf4aP49698 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hnf4aP49698 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hnf4aP49698 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hnf4aP49698 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hnf4aP49698 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hnf4aP49698 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hnf4aP49698 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hnf4aP49698 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hnf4aP49698 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hnf4aP49698 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hnf4aP49698 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hnf4aP49698 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hnf4aP49698 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hnf4aP49698 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hnf4aP49698 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.62■□□□□ 0.41
Hnf4aP49698 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hnf4aP49698 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hnf4aP49698 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hnf4aP49698 Gm26571-201ENSMUST00000181399 666 ntBASIC17.62■□□□□ 0.41
Hnf4aP49698 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Hnf4aP49698 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hnf4aP49698 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hnf4aP49698 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Hnf4aP49698 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hnf4aP49698 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hnf4aP49698 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hnf4aP49698 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hnf4aP49698 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hnf4aP49698 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms