Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hist1h1aP43275 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hist1h1aP43275 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.06■□□□□ 0
Hist1h1aP43275 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hist1h1aP43275 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.06■□□□□ 0
Hist1h1aP43275 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Hist1h1aP43275 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hist1h1aP43275 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.05■□□□□ 0
Hist1h1aP43275 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Hist1h1aP43275 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hist1h1aP43275 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Hist1h1aP43275 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hist1h1aP43275 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Hist1h1aP43275 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.05■□□□□ -0
Hist1h1aP43275 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.05■□□□□ -0
Hist1h1aP43275 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.05■□□□□ -0
Hist1h1aP43275 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.05■□□□□ -0
Hist1h1aP43275 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hist1h1aP43275 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h1aP43275 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h1aP43275 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h1aP43275 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h1aP43275 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h1aP43275 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h1aP43275 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h1aP43275 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hist1h1aP43275 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h1aP43275 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h1aP43275 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.04■□□□□ -0
Hist1h1aP43275 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h1aP43275 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h1aP43275 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h1aP43275 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h1aP43275 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.04■□□□□ -0
Hist1h1aP43275 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h1aP43275 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h1aP43275 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h1aP43275 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h1aP43275 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h1aP43275 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.03■□□□□ -0
Hist1h1aP43275 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Hist1h1aP43275 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hist1h1aP43275 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.03■□□□□ -0
Hist1h1aP43275 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Hist1h1aP43275 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Hist1h1aP43275 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Hist1h1aP43275 Gm27454-201ENSMUST00000185090 204 ntBASIC15.03■□□□□ -0
Hist1h1aP43275 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.03■□□□□ -0
Hist1h1aP43275 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Hist1h1aP43275 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.03■□□□□ -0
Hist1h1aP43275 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h1aP43275 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h1aP43275 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h1aP43275 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Hist1h1aP43275 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hist1h1aP43275 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h1aP43275 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.02■□□□□ -0
Hist1h1aP43275 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h1aP43275 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h1aP43275 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hist1h1aP43275 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hist1h1aP43275 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Hist1h1aP43275 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Hist1h1aP43275 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h1aP43275 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hist1h1aP43275 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hist1h1aP43275 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms