Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Gm26524-201ENSMUST00000192339 390 ntBASIC16.76■□□□□ 0.27
Nkx2-2P42586 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-2P42586 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-2P42586 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-2P42586 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nkx2-2P42586 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-2P42586 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.75■□□□□ 0.27
Nkx2-2P42586 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.75■□□□□ 0.27
Nkx2-2P42586 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.75■□□□□ 0.27
Nkx2-2P42586 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-2P42586 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-2P42586 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx2-2P42586 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.74■□□□□ 0.27
Nkx2-2P42586 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Tgds-204ENSMUST00000228543 1594 ntBASIC16.74■□□□□ 0.27
Nkx2-2P42586 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.74■□□□□ 0.27
Nkx2-2P42586 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.74■□□□□ 0.27
Nkx2-2P42586 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-2P42586 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-2P42586 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-2P42586 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-2P42586 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-2P42586 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-2P42586 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.73■□□□□ 0.27
Nkx2-2P42586 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-2P42586 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Nkx2-2P42586 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-2P42586 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.73■□□□□ 0.27
Nkx2-2P42586 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nkx2-2P42586 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-2P42586 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-2P42586 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Nkx2-2P42586 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.72■□□□□ 0.27
Nkx2-2P42586 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-2P42586 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Rab3c-203ENSMUST00000224180 967 ntBASIC16.72■□□□□ 0.27
Nkx2-2P42586 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-2P42586 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-2P42586 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Nkx2-2P42586 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.71■□□□□ 0.27
Nkx2-2P42586 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-2P42586 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-2P42586 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-2P42586 Gm44549-201ENSMUST00000208351 577 ntBASIC16.71■□□□□ 0.27
Nkx2-2P42586 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nkx2-2P42586 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-2P42586 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Nkx2-2P42586 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-2P42586 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-2P42586 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nkx2-2P42586 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nkx2-2P42586 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-2P42586 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms