Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.9■□□□□ 0.62
Cxcl12P40224 Gm17661-201ENSMUST00000170317 270 ntBASIC18.9■□□□□ 0.62
Cxcl12P40224 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl12P40224 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cxcl12P40224 Gm17971-201ENSMUST00000190239 806 ntBASIC18.9■□□□□ 0.62
Cxcl12P40224 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cxcl12P40224 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl12P40224 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cxcl12P40224 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Cxcl12P40224 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cxcl12P40224 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cxcl12P40224 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cxcl12P40224 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cxcl12P40224 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.89■□□□□ 0.61
Cxcl12P40224 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cxcl12P40224 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cxcl12P40224 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cxcl12P40224 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cxcl12P40224 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl12P40224 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cxcl12P40224 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl12P40224 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.88■□□□□ 0.61
Cxcl12P40224 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.88■□□□□ 0.61
Cxcl12P40224 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cxcl12P40224 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl12P40224 Gm7461-201ENSMUST00000058918 827 ntBASIC18.88■□□□□ 0.61
Cxcl12P40224 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl12P40224 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl12P40224 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl12P40224 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl12P40224 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cxcl12P40224 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl12P40224 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl12P40224 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl12P40224 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl12P40224 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cxcl12P40224 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl12P40224 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl12P40224 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl12P40224 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cxcl12P40224 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.87■□□□□ 0.61
Cxcl12P40224 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl12P40224 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl12P40224 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl12P40224 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl12P40224 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.87■□□□□ 0.61
Cxcl12P40224 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.86■□□□□ 0.61
Cxcl12P40224 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cxcl12P40224 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Cxcl12P40224 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.86■□□□□ 0.61
Cxcl12P40224 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cxcl12P40224 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl12P40224 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcl12P40224 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Cxcl12P40224 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cxcl12P40224 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cxcl12P40224 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.85■□□□□ 0.61
Cxcl12P40224 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.85■□□□□ 0.61
Cxcl12P40224 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cxcl12P40224 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcl12P40224 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cxcl12P40224 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.85■□□□□ 0.61
Cxcl12P40224 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcl12P40224 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.85■□□□□ 0.61
Cxcl12P40224 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcl12P40224 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Cxcl12P40224 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcl12P40224 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcl12P40224 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcl12P40224 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cxcl12P40224 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcl12P40224 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcl12P40224 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cxcl12P40224 Gm38027-201ENSMUST00000192315 235 ntBASIC18.84■□□□□ 0.61
Cxcl12P40224 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcl12P40224 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.84■□□□□ 0.61
Cxcl12P40224 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcl12P40224 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcl12P40224 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cxcl12P40224 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cxcl12P40224 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cxcl12P40224 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cxcl12P40224 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Cxcl12P40224 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.83■□□□□ 0.6
Cxcl12P40224 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl12P40224 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl12P40224 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl12P40224 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl12P40224 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cxcl12P40224 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms