Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fen1P39749 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.35■□□□□ 0.53
Fen1P39749 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Fen1P39749 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Fen1P39749 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Fen1P39749 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fen1P39749 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Fen1P39749 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fen1P39749 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fen1P39749 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Fen1P39749 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fen1P39749 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fen1P39749 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Fen1P39749 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.33■□□□□ 0.52
Fen1P39749 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Fen1P39749 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fen1P39749 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fen1P39749 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fen1P39749 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fen1P39749 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.33■□□□□ 0.52
Fen1P39749 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.33■□□□□ 0.52
Fen1P39749 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fen1P39749 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.32■□□□□ 0.52
Fen1P39749 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.32■□□□□ 0.52
Fen1P39749 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Fen1P39749 Gm7860-201ENSMUST00000121190 879 ntBASIC18.32■□□□□ 0.52
Fen1P39749 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.32■□□□□ 0.52
Fen1P39749 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fen1P39749 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fen1P39749 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fen1P39749 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fen1P39749 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Fen1P39749 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Fen1P39749 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fen1P39749 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fen1P39749 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Fen1P39749 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fen1P39749 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Fen1P39749 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.31■□□□□ 0.52
Fen1P39749 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Fen1P39749 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Fen1P39749 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.31■□□□□ 0.52
Fen1P39749 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fen1P39749 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.31■□□□□ 0.52
Fen1P39749 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Fen1P39749 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Fen1P39749 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fen1P39749 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Fen1P39749 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fen1P39749 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Fen1P39749 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fen1P39749 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.3■□□□□ 0.52
Fen1P39749 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.3■□□□□ 0.52
Fen1P39749 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Fen1P39749 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Fen1P39749 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fen1P39749 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.3■□□□□ 0.52
Fen1P39749 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Gm12251-201ENSMUST00000117893 792 ntBASIC18.29■□□□□ 0.52
Fen1P39749 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.29■□□□□ 0.52
Fen1P39749 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fen1P39749 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fen1P39749 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fen1P39749 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fen1P39749 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fen1P39749 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms