Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a1P31648 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a1P31648 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a1P31648 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a1P31648 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a1P31648 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Slc6a1P31648 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a1P31648 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a1P31648 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a1P31648 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a1P31648 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Slc6a1P31648 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.69■□□□□ 0.1
Slc6a1P31648 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.69■□□□□ 0.1
Slc6a1P31648 Gm45417-201ENSMUST00000209533 758 ntBASIC15.69■□□□□ 0.1
Slc6a1P31648 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.69■□□□□ 0.1
Slc6a1P31648 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a1P31648 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Slc6a1P31648 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a1P31648 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a1P31648 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a1P31648 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.68■□□□□ 0.1
Slc6a1P31648 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Slc6a1P31648 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Slc6a1P31648 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.68■□□□□ 0.1
Slc6a1P31648 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a1P31648 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Slc6a1P31648 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.67■□□□□ 0.1
Slc6a1P31648 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Slc6a1P31648 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a1P31648 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Slc6a1P31648 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Slc6a1P31648 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.66■□□□□ 0.1
Slc6a1P31648 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.66■□□□□ 0.1
Slc6a1P31648 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.66■□□□□ 0.1
Slc6a1P31648 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
Slc6a1P31648 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.66■□□□□ 0.1
Slc6a1P31648 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Slc6a1P31648 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.66■□□□□ 0.1
Slc6a1P31648 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a1P31648 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc6a1P31648 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a1P31648 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc6a1P31648 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a1P31648 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a1P31648 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a1P31648 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc6a1P31648 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.65■□□□□ 0.1
Slc6a1P31648 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc6a1P31648 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.65■□□□□ 0.1
Slc6a1P31648 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc6a1P31648 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a1P31648 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Slc6a1P31648 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a1P31648 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a1P31648 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Slc6a1P31648 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Slc6a1P31648 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Slc6a1P31648 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a1P31648 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Slc6a1P31648 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a1P31648 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms