Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Vcam1P29533 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Vcam1P29533 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.12■□□□□ 0.97
Vcam1P29533 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.11■□□□□ 0.97
Vcam1P29533 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Vcam1P29533 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Vcam1P29533 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Vcam1P29533 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Vcam1P29533 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Vcam1P29533 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Vcam1P29533 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Vcam1P29533 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Vcam1P29533 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Vcam1P29533 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcam1P29533 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.11■□□□□ 0.97
Vcam1P29533 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcam1P29533 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Vcam1P29533 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.1■□□□□ 0.97
Vcam1P29533 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Vcam1P29533 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcam1P29533 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcam1P29533 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.1■□□□□ 0.97
Vcam1P29533 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcam1P29533 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vcam1P29533 Mir2861-201ENSMUST00000175539 82 ntBASIC21.1■□□□□ 0.97
Vcam1P29533 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.1■□□□□ 0.97
Vcam1P29533 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcam1P29533 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcam1P29533 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Vcam1P29533 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcam1P29533 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcam1P29533 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Vcam1P29533 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcam1P29533 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vcam1P29533 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Vcam1P29533 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.09■□□□□ 0.97
Vcam1P29533 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcam1P29533 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcam1P29533 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.09■□□□□ 0.97
Vcam1P29533 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.09■□□□□ 0.97
Vcam1P29533 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcam1P29533 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcam1P29533 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcam1P29533 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcam1P29533 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vcam1P29533 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.08■□□□□ 0.97
Vcam1P29533 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.08■□□□□ 0.97
Vcam1P29533 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vcam1P29533 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.08■□□□□ 0.97
Vcam1P29533 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vcam1P29533 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vcam1P29533 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vcam1P29533 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Vcam1P29533 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcam1P29533 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcam1P29533 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Vcam1P29533 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcam1P29533 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.07■□□□□ 0.96
Vcam1P29533 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vcam1P29533 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.07■□□□□ 0.96
Vcam1P29533 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.07■□□□□ 0.96
Vcam1P29533 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcam1P29533 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcam1P29533 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcam1P29533 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcam1P29533 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.07■□□□□ 0.96
Vcam1P29533 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcam1P29533 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Vcam1P29533 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcam1P29533 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Vcam1P29533 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcam1P29533 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Vcam1P29533 Gm12382-201ENSMUST00000122005 922 ntBASIC21.06■□□□□ 0.96
Vcam1P29533 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Vcam1P29533 Gm43799-201ENSMUST00000201845 579 ntBASIC21.06■□□□□ 0.96
Vcam1P29533 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Vcam1P29533 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.06■□□□□ 0.96
Vcam1P29533 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcam1P29533 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcam1P29533 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Vcam1P29533 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcam1P29533 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcam1P29533 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Vcam1P29533 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcam1P29533 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vcam1P29533 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.05■□□□□ 0.96
Vcam1P29533 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms