Protein–RNA interactions for Protein: P28271

Aco1, Cytoplasmic aconitate hydratase, mousemouse

Known RBP Predictions only

Length 889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aco1P28271 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Aco1P28271 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Aco1P28271 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Aco1P28271 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Gm11249-201ENSMUST00000117071 859 ntBASIC20.78■□□□□ 0.92
Aco1P28271 Gm22325-201ENSMUST00000158904 308 ntBASIC20.78■□□□□ 0.92
Aco1P28271 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Aco1P28271 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.78■□□□□ 0.92
Aco1P28271 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.78■□□□□ 0.92
Aco1P28271 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aco1P28271 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Aco1P28271 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Aco1P28271 Gm2399-201ENSMUST00000104944 225 ntBASIC20.77■□□□□ 0.92
Aco1P28271 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Aco1P28271 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Aco1P28271 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.77■□□□□ 0.92
Aco1P28271 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Aco1P28271 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Aco1P28271 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Aco1P28271 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Aco1P28271 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Aco1P28271 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Aco1P28271 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Aco1P28271 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Aco1P28271 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Aco1P28271 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.76■□□□□ 0.91
Aco1P28271 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Aco1P28271 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Aco1P28271 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Aco1P28271 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Aco1P28271 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Aco1P28271 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Aco1P28271 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.75■□□□□ 0.91
Aco1P28271 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Aco1P28271 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Aco1P28271 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Aco1P28271 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Aco1P28271 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Aco1P28271 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Aco1P28271 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.75■□□□□ 0.91
Aco1P28271 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Aco1P28271 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.75■□□□□ 0.91
Aco1P28271 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Aco1P28271 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Aco1P28271 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Aco1P28271 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Aco1P28271 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.74■□□□□ 0.91
Aco1P28271 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Aco1P28271 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.74■□□□□ 0.91
Aco1P28271 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.74■□□□□ 0.91
Aco1P28271 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Aco1P28271 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Aco1P28271 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.74■□□□□ 0.91
Aco1P28271 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.74■□□□□ 0.91
Aco1P28271 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Aco1P28271 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Aco1P28271 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Aco1P28271 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Aco1P28271 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Aco1P28271 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Aco1P28271 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.73■□□□□ 0.91
Aco1P28271 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.73■□□□□ 0.91
Aco1P28271 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.73■□□□□ 0.91
Aco1P28271 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.73■□□□□ 0.91
Aco1P28271 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Aco1P28271 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Aco1P28271 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Aco1P28271 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Aco1P28271 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Aco1P28271 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Aco1P28271 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Aco1P28271 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Aco1P28271 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Aco1P28271 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Aco1P28271 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Aco1P28271 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Aco1P28271 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.72■□□□□ 0.91
Aco1P28271 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Aco1P28271 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Aco1P28271 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Aco1P28271 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Aco1P28271 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Aco1P28271 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Aco1P28271 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.71■□□□□ 0.91
Aco1P28271 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.71■□□□□ 0.91
Aco1P28271 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Aco1P28271 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms