Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pde6aP27664 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pde6aP27664 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pde6aP27664 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6aP27664 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pde6aP27664 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6aP27664 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6aP27664 Gm2399-201ENSMUST00000104944 225 ntBASIC21.21■□□□□ 0.99
Pde6aP27664 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Pde6aP27664 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.21■□□□□ 0.99
Pde6aP27664 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pde6aP27664 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.21■□□□□ 0.99
Pde6aP27664 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.21■□□□□ 0.99
Pde6aP27664 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pde6aP27664 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6aP27664 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6aP27664 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Pde6aP27664 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.2■□□□□ 0.98
Pde6aP27664 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6aP27664 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.2■□□□□ 0.98
Pde6aP27664 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pde6aP27664 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6aP27664 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6aP27664 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6aP27664 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pde6aP27664 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6aP27664 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6aP27664 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6aP27664 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6aP27664 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.19■□□□□ 0.98
Pde6aP27664 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6aP27664 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6aP27664 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pde6aP27664 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pde6aP27664 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.19■□□□□ 0.98
Pde6aP27664 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6aP27664 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6aP27664 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.19■□□□□ 0.98
Pde6aP27664 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6aP27664 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.18■□□□□ 0.98
Pde6aP27664 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6aP27664 Gm12527-201ENSMUST00000117967 564 ntBASIC21.18■□□□□ 0.98
Pde6aP27664 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.18■□□□□ 0.98
Pde6aP27664 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6aP27664 Gm20049-201ENSMUST00000219950 730 ntBASIC21.18■□□□□ 0.98
Pde6aP27664 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.18■□□□□ 0.98
Pde6aP27664 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6aP27664 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6aP27664 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6aP27664 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6aP27664 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6aP27664 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Pde6aP27664 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pde6aP27664 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6aP27664 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6aP27664 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.17■□□□□ 0.98
Pde6aP27664 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6aP27664 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6aP27664 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.17■□□□□ 0.98
Pde6aP27664 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6aP27664 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6aP27664 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6aP27664 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6aP27664 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6aP27664 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6aP27664 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pde6aP27664 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.16■□□□□ 0.98
Pde6aP27664 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.16■□□□□ 0.98
Pde6aP27664 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.16■□□□□ 0.98
Pde6aP27664 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6aP27664 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6aP27664 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6aP27664 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.15■□□□□ 0.98
Pde6aP27664 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6aP27664 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.15■□□□□ 0.98
Pde6aP27664 Gm12896-201ENSMUST00000118430 226 ntBASIC21.15■□□□□ 0.98
Pde6aP27664 Gm2559-201ENSMUST00000201323 363 ntBASIC21.15■□□□□ 0.98
Pde6aP27664 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6aP27664 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.15■□□□□ 0.98
Pde6aP27664 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6aP27664 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pde6aP27664 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pde6aP27664 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pde6aP27664 Dio3-201ENSMUST00000097228 1449 ntBASIC21.14■□□□□ 0.98
Pde6aP27664 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.14■□□□□ 0.97
Pde6aP27664 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pde6aP27664 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.14■□□□□ 0.97
Pde6aP27664 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.14■□□□□ 0.97
Pde6aP27664 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms