Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1bP25119 Gm4968-201ENSMUST00000071458 858 ntBASIC16.93■□□□□ 0.3
Tnfrsf1bP25119 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1bP25119 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1bP25119 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1bP25119 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1bP25119 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Tnfrsf1bP25119 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1bP25119 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1bP25119 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Tnfrsf1bP25119 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Gm12441-201ENSMUST00000121806 588 ntBASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Gm22325-201ENSMUST00000158904 308 ntBASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1bP25119 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tnfrsf1bP25119 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.89■□□□□ 0.29
Tnfrsf1bP25119 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf1bP25119 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms