Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Hmga1P17095 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmga1P17095 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmga1P17095 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hmga1P17095 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmga1P17095 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmga1P17095 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.73■□□□□ 0.59
Hmga1P17095 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.73■□□□□ 0.59
Hmga1P17095 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmga1P17095 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hmga1P17095 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmga1P17095 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmga1P17095 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmga1P17095 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmga1P17095 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hmga1P17095 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.72■□□□□ 0.59
Hmga1P17095 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.72■□□□□ 0.59
Hmga1P17095 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Hmga1P17095 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hmga1P17095 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hmga1P17095 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hmga1P17095 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.72■□□□□ 0.59
Hmga1P17095 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hmga1P17095 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.72■□□□□ 0.59
Hmga1P17095 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmga1P17095 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.72■□□□□ 0.59
Hmga1P17095 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hmga1P17095 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Hmga1P17095 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.71■□□□□ 0.59
Hmga1P17095 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.71■□□□□ 0.59
Hmga1P17095 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.71■□□□□ 0.59
Hmga1P17095 Gm18025-201ENSMUST00000221733 862 ntBASIC18.71■□□□□ 0.59
Hmga1P17095 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.71■□□□□ 0.59
Hmga1P17095 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.71■□□□□ 0.59
Hmga1P17095 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmga1P17095 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmga1P17095 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmga1P17095 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Hmga1P17095 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmga1P17095 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmga1P17095 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.7■□□□□ 0.58
Hmga1P17095 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmga1P17095 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmga1P17095 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmga1P17095 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga1P17095 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hmga1P17095 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Hmga1P17095 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hmga1P17095 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga1P17095 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hmga1P17095 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga1P17095 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.69■□□□□ 0.58
Hmga1P17095 Gm43183-201ENSMUST00000200632 547 ntBASIC18.69■□□□□ 0.58
Hmga1P17095 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Hmga1P17095 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga1P17095 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.69■□□□□ 0.58
Hmga1P17095 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hmga1P17095 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga1P17095 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.69■□□□□ 0.58
Hmga1P17095 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga1P17095 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga1P17095 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga1P17095 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga1P17095 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hmga1P17095 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.68■□□□□ 0.58
Hmga1P17095 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga1P17095 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga1P17095 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.68■□□□□ 0.58
Hmga1P17095 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.68■□□□□ 0.58
Hmga1P17095 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.68■□□□□ 0.58
Hmga1P17095 Gm42545-201ENSMUST00000202755 922 ntBASIC18.68■□□□□ 0.58
Hmga1P17095 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.68■□□□□ 0.58
Hmga1P17095 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga1P17095 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga1P17095 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga1P17095 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga1P17095 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga1P17095 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga1P17095 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.67■□□□□ 0.58
Hmga1P17095 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
Hmga1P17095 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga1P17095 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga1P17095 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga1P17095 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.67■□□□□ 0.58
Hmga1P17095 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Hmga1P17095 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Hmga1P17095 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.67■□□□□ 0.58
Hmga1P17095 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga1P17095 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga1P17095 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms