Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RaraP11416 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RaraP11416 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RaraP11416 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.74■□□□□ 0.75
RaraP11416 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RaraP11416 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RaraP11416 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.74■□□□□ 0.75
RaraP11416 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RaraP11416 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RaraP11416 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RaraP11416 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RaraP11416 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RaraP11416 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
RaraP11416 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RaraP11416 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RaraP11416 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RaraP11416 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RaraP11416 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RaraP11416 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RaraP11416 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.73■□□□□ 0.75
RaraP11416 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RaraP11416 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RaraP11416 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RaraP11416 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RaraP11416 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RaraP11416 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RaraP11416 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RaraP11416 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RaraP11416 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.72■□□□□ 0.75
RaraP11416 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RaraP11416 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RaraP11416 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
RaraP11416 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.72■□□□□ 0.75
RaraP11416 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RaraP11416 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RaraP11416 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RaraP11416 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RaraP11416 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RaraP11416 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.71■□□□□ 0.75
RaraP11416 Tgds-204ENSMUST00000228543 1594 ntBASIC19.71■□□□□ 0.75
RaraP11416 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RaraP11416 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RaraP11416 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RaraP11416 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.7■□□□□ 0.74
RaraP11416 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.7■□□□□ 0.74
RaraP11416 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RaraP11416 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
RaraP11416 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RaraP11416 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RaraP11416 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RaraP11416 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RaraP11416 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.69■□□□□ 0.74
RaraP11416 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RaraP11416 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RaraP11416 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RaraP11416 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RaraP11416 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RaraP11416 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.69■□□□□ 0.74
RaraP11416 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RaraP11416 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RaraP11416 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.68■□□□□ 0.74
RaraP11416 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RaraP11416 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RaraP11416 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RaraP11416 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RaraP11416 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.68■□□□□ 0.74
RaraP11416 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RaraP11416 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.68■□□□□ 0.74
RaraP11416 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RaraP11416 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RaraP11416 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.68■□□□□ 0.74
RaraP11416 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RaraP11416 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.68■□□□□ 0.74
RaraP11416 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RaraP11416 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.67■□□□□ 0.74
RaraP11416 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RaraP11416 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms