Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.21□□□□□ -0.13
Ccl1P10146 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl1P10146 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl1P10146 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.21□□□□□ -0.14
Ccl1P10146 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl1P10146 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccl1P10146 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ccl1P10146 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.2□□□□□ -0.14
Ccl1P10146 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccl1P10146 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccl1P10146 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl1P10146 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ccl1P10146 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ccl1P10146 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.19□□□□□ -0.14
Ccl1P10146 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccl1P10146 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.19□□□□□ -0.14
Ccl1P10146 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl1P10146 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Ccl1P10146 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccl1P10146 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccl1P10146 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccl1P10146 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl1P10146 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.17□□□□□ -0.14
Ccl1P10146 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccl1P10146 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccl1P10146 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl1P10146 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms