Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col4a1P02463 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Col4a1P02463 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC22.68■■□□□ 1.22
Col4a1P02463 Timm23-208ENSMUST00000226683 750 ntBASIC22.68■■□□□ 1.22
Col4a1P02463 AC156016.1-201ENSMUST00000227190 1035 ntBASIC22.68■■□□□ 1.22
Col4a1P02463 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Col4a1P02463 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col4a1P02463 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Col4a1P02463 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC22.67■■□□□ 1.22
Col4a1P02463 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col4a1P02463 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.67■■□□□ 1.22
Col4a1P02463 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col4a1P02463 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Col4a1P02463 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
Col4a1P02463 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col4a1P02463 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Col4a1P02463 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.67■■□□□ 1.22
Col4a1P02463 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col4a1P02463 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col4a1P02463 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col4a1P02463 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col4a1P02463 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col4a1P02463 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Col4a1P02463 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC22.66■■□□□ 1.22
Col4a1P02463 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Col4a1P02463 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC22.66■■□□□ 1.22
Col4a1P02463 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col4a1P02463 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col4a1P02463 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col4a1P02463 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Col4a1P02463 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Col4a1P02463 Mir6349-201ENSMUST00000184059 97 ntBASIC22.65■■□□□ 1.22
Col4a1P02463 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC22.65■■□□□ 1.22
Col4a1P02463 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Col4a1P02463 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col4a1P02463 Gm38345-201ENSMUST00000192635 1748 ntBASIC22.65■■□□□ 1.22
Col4a1P02463 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Col4a1P02463 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Col4a1P02463 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Col4a1P02463 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Col4a1P02463 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC22.65■■□□□ 1.22
Col4a1P02463 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col4a1P02463 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col4a1P02463 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.22
Col4a1P02463 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.64■■□□□ 1.22
Col4a1P02463 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col4a1P02463 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col4a1P02463 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col4a1P02463 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC22.64■■□□□ 1.21
Col4a1P02463 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC22.64■■□□□ 1.21
Col4a1P02463 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col4a1P02463 Gm10819-201ENSMUST00000099988 561 ntBASIC22.64■■□□□ 1.21
Col4a1P02463 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col4a1P02463 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Col4a1P02463 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col4a1P02463 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col4a1P02463 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Col4a1P02463 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col4a1P02463 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC22.63■■□□□ 1.21
Col4a1P02463 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Col4a1P02463 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col4a1P02463 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Col4a1P02463 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC22.62■■□□□ 1.21
Col4a1P02463 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col4a1P02463 Gm38308-201ENSMUST00000194934 1809 ntBASIC22.62■■□□□ 1.21
Col4a1P02463 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Col4a1P02463 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col4a1P02463 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col4a1P02463 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Col4a1P02463 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC22.62■■□□□ 1.21
Col4a1P02463 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col4a1P02463 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col4a1P02463 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Col4a1P02463 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col4a1P02463 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Col4a1P02463 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col4a1P02463 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC22.61■■□□□ 1.21
Col4a1P02463 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col4a1P02463 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC22.61■■□□□ 1.21
Col4a1P02463 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col4a1P02463 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col4a1P02463 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col4a1P02463 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col4a1P02463 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col4a1P02463 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col4a1P02463 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col4a1P02463 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col4a1P02463 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col4a1P02463 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.6■■□□□ 1.21
Col4a1P02463 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col4a1P02463 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col4a1P02463 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC22.59■■□□□ 1.21
Col4a1P02463 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col4a1P02463 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Col4a1P02463 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col4a1P02463 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Col4a1P02463 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC22.58■■□□□ 1.21
Col4a1P02463 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Col4a1P02463 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Col4a1P02463 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms