Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01852 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
P01852 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01852 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.66■□□□□ 0.26
P01852 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.66■□□□□ 0.26
P01852 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.66■□□□□ 0.26
P01852 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
P01852 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.65■□□□□ 0.26
P01852 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.65■□□□□ 0.26
P01852 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
P01852 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.65■□□□□ 0.26
P01852 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.65■□□□□ 0.26
P01852 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
P01852 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
P01852 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
P01852 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01852 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.64■□□□□ 0.25
P01852 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
P01852 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.64■□□□□ 0.25
P01852 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.64■□□□□ 0.25
P01852 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
P01852 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
P01852 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
P01852 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
P01852 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01852 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.63■□□□□ 0.25
P01852 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 BC021767-201ENSMUST00000126387 1716 ntBASIC16.63■□□□□ 0.25
P01852 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.63■□□□□ 0.25
P01852 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
P01852 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
P01852 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01852 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.63■□□□□ 0.25
P01852 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.62■□□□□ 0.25
P01852 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.62■□□□□ 0.25
P01852 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.62■□□□□ 0.25
P01852 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01852 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.62■□□□□ 0.25
P01852 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.62■□□□□ 0.25
P01852 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
P01852 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms