Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.82■□□□□ 0.12
Igh-VJ558P01758 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Gm42569-201ENSMUST00000200539 472 ntBASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Gm6365-201ENSMUST00000054711 744 ntBASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.81■□□□□ 0.12
Igh-VJ558P01758 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igh-VJ558P01758 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Igh-VJ558P01758 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.8■□□□□ 0.12
Igh-VJ558P01758 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Igh-VJ558P01758 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igh-VJ558P01758 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.8■□□□□ 0.12
Igh-VJ558P01758 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igh-VJ558P01758 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Igh-VJ558P01758 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igh-VJ558P01758 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Igh-VJ558P01758 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igh-VJ558P01758 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igh-VJ558P01758 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Gm7290-201ENSMUST00000104990 617 ntBASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Gm12918-201ENSMUST00000120234 636 ntBASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Gm15710-201ENSMUST00000121821 636 ntBASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Gm5075-201ENSMUST00000196916 622 ntBASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igh-VJ558P01758 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igh-VJ558P01758 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igh-VJ558P01758 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.77■□□□□ 0.11
Igh-VJ558P01758 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Igh-VJ558P01758 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Igh-VJ558P01758 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.77■□□□□ 0.11
Igh-VJ558P01758 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igh-VJ558P01758 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms