Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ifnb1P01575 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ifnb1P01575 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ifnb1P01575 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.28■□□□□ 0.68
Ifnb1P01575 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Ifnb1P01575 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ifnb1P01575 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ifnb1P01575 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ifnb1P01575 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ifnb1P01575 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ifnb1P01575 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.27■□□□□ 0.68
Ifnb1P01575 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
Ifnb1P01575 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ifnb1P01575 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.27■□□□□ 0.68
Ifnb1P01575 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.27■□□□□ 0.68
Ifnb1P01575 AV356131-201ENSMUST00000206201 750 ntBASIC19.27■□□□□ 0.68
Ifnb1P01575 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ifnb1P01575 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ifnb1P01575 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ifnb1P01575 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ifnb1P01575 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ifnb1P01575 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ifnb1P01575 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ifnb1P01575 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ifnb1P01575 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ifnb1P01575 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ifnb1P01575 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ifnb1P01575 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Ifnb1P01575 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ifnb1P01575 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ifnb1P01575 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ifnb1P01575 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.26■□□□□ 0.67
Ifnb1P01575 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.26■□□□□ 0.67
Ifnb1P01575 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ifnb1P01575 Rarb-207ENSMUST00000225921 2756 ntBASIC19.26■□□□□ 0.67
Ifnb1P01575 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ifnb1P01575 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.25■□□□□ 0.67
Ifnb1P01575 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifnb1P01575 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.25■□□□□ 0.67
Ifnb1P01575 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ifnb1P01575 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifnb1P01575 Fst-202ENSMUST00000223640 2612 ntBASIC19.24■□□□□ 0.67
Ifnb1P01575 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifnb1P01575 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.24■□□□□ 0.67
Ifnb1P01575 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ifnb1P01575 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifnb1P01575 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifnb1P01575 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ifnb1P01575 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifnb1P01575 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifnb1P01575 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifnb1P01575 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifnb1P01575 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifnb1P01575 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ifnb1P01575 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ifnb1P01575 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ifnb1P01575 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.23■□□□□ 0.67
Ifnb1P01575 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Ifnb1P01575 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ifnb1P01575 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ifnb1P01575 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ifnb1P01575 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ifnb1P01575 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Ifnb1P01575 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.22■□□□□ 0.67
Ifnb1P01575 Gm18284-201ENSMUST00000172604 624 ntBASIC19.22■□□□□ 0.67
Ifnb1P01575 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.22■□□□□ 0.67
Ifnb1P01575 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ifnb1P01575 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ifnb1P01575 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ifnb1P01575 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ifnb1P01575 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.21■□□□□ 0.67
Ifnb1P01575 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ifnb1P01575 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ifnb1P01575 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms