Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syn1O88935 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Syn1O88935 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Syn1O88935 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 Gm15375-201ENSMUST00000119510 849 ntBASIC18.82■□□□□ 0.6
Syn1O88935 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Syn1O88935 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Syn1O88935 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syn1O88935 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.81■□□□□ 0.6
Syn1O88935 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Syn1O88935 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syn1O88935 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Syn1O88935 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Syn1O88935 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Syn1O88935 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syn1O88935 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syn1O88935 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.79■□□□□ 0.6
Syn1O88935 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Syn1O88935 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syn1O88935 Mir5130-201ENSMUST00000175160 84 ntBASIC18.79■□□□□ 0.6
Syn1O88935 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.79■□□□□ 0.6
Syn1O88935 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syn1O88935 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syn1O88935 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syn1O88935 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syn1O88935 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Syn1O88935 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syn1O88935 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.79■□□□□ 0.6
Syn1O88935 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syn1O88935 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syn1O88935 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.78■□□□□ 0.6
Syn1O88935 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Syn1O88935 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.78■□□□□ 0.6
Syn1O88935 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.78■□□□□ 0.6
Syn1O88935 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syn1O88935 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syn1O88935 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syn1O88935 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Syn1O88935 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Syn1O88935 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syn1O88935 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syn1O88935 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syn1O88935 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Syn1O88935 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syn1O88935 Gm17661-201ENSMUST00000170317 270 ntBASIC18.77■□□□□ 0.6
Syn1O88935 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Syn1O88935 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.77■□□□□ 0.6
Syn1O88935 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.77■□□□□ 0.6
Syn1O88935 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syn1O88935 Zfp783-201ENSMUST00000095946 670 ntBASIC18.77■□□□□ 0.6
Syn1O88935 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syn1O88935 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syn1O88935 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Syn1O88935 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syn1O88935 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Syn1O88935 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syn1O88935 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syn1O88935 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syn1O88935 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syn1O88935 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syn1O88935 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.76■□□□□ 0.59
Syn1O88935 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Syn1O88935 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syn1O88935 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syn1O88935 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syn1O88935 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syn1O88935 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Syn1O88935 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syn1O88935 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms