Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a20bO88575 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Slc6a20bO88575 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Slc6a20bO88575 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a20bO88575 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a20bO88575 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Slc6a20bO88575 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Slc6a20bO88575 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc6a20bO88575 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20■□□□□ 0.79
Slc6a20bO88575 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a20bO88575 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a20bO88575 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Slc6a20bO88575 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.99■□□□□ 0.79
Slc6a20bO88575 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a20bO88575 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Gm14859-201ENSMUST00000117752 357 ntBASIC19.98■□□□□ 0.79
Slc6a20bO88575 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a20bO88575 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20bO88575 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Mir5130-201ENSMUST00000175160 84 ntBASIC19.97■□□□□ 0.79
Slc6a20bO88575 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20bO88575 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
Slc6a20bO88575 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Gm12085-201ENSMUST00000119263 940 ntBASIC19.96■□□□□ 0.79
Slc6a20bO88575 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Gm27463-201ENSMUST00000183569 57 ntBASIC19.96■□□□□ 0.79
Slc6a20bO88575 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20bO88575 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20bO88575 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Slc6a20bO88575 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20bO88575 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.95■□□□□ 0.78
Slc6a20bO88575 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20bO88575 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20bO88575 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20bO88575 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.95■□□□□ 0.78
Slc6a20bO88575 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Slc6a20bO88575 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20bO88575 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20bO88575 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20bO88575 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20bO88575 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.94■□□□□ 0.78
Slc6a20bO88575 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20bO88575 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20bO88575 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.94■□□□□ 0.78
Slc6a20bO88575 Gm18101-201ENSMUST00000215769 548 ntBASIC19.94■□□□□ 0.78
Slc6a20bO88575 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20bO88575 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20bO88575 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20bO88575 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20bO88575 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Slc6a20bO88575 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Slc6a20bO88575 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20bO88575 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20bO88575 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.93■□□□□ 0.78
Slc6a20bO88575 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20bO88575 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20bO88575 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20bO88575 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms