Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cops3O88543 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops3O88543 Gm45417-201ENSMUST00000209533 758 ntBASIC16.35■□□□□ 0.21
Cops3O88543 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.35■□□□□ 0.21
Cops3O88543 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.35■□□□□ 0.21
Cops3O88543 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops3O88543 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops3O88543 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cops3O88543 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops3O88543 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.35■□□□□ 0.21
Cops3O88543 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cops3O88543 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops3O88543 Fst-202ENSMUST00000223640 2612 ntBASIC16.34■□□□□ 0.21
Cops3O88543 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops3O88543 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops3O88543 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cops3O88543 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops3O88543 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops3O88543 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.34■□□□□ 0.21
Cops3O88543 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops3O88543 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops3O88543 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cops3O88543 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cops3O88543 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.33■□□□□ 0.21
Cops3O88543 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cops3O88543 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.33■□□□□ 0.21
Cops3O88543 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cops3O88543 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.33■□□□□ 0.2
Cops3O88543 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.33■□□□□ 0.2
Cops3O88543 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Gm43017-201ENSMUST00000198296 752 ntBASIC16.33■□□□□ 0.2
Cops3O88543 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.33■□□□□ 0.2
Cops3O88543 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cops3O88543 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cops3O88543 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cops3O88543 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.32■□□□□ 0.2
Cops3O88543 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops3O88543 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops3O88543 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops3O88543 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cops3O88543 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Cops3O88543 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.32■□□□□ 0.2
Cops3O88543 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.32■□□□□ 0.2
Cops3O88543 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops3O88543 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops3O88543 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops3O88543 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops3O88543 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cops3O88543 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.31■□□□□ 0.2
Cops3O88543 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cops3O88543 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.31■□□□□ 0.2
Cops3O88543 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cops3O88543 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Cops3O88543 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cops3O88543 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cops3O88543 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.31■□□□□ 0.2
Cops3O88543 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops3O88543 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops3O88543 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cops3O88543 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cops3O88543 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Cops3O88543 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cops3O88543 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.3■□□□□ 0.2
Cops3O88543 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.3■□□□□ 0.2
Cops3O88543 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cops3O88543 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.3■□□□□ 0.2
Cops3O88543 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.3■□□□□ 0.2
Cops3O88543 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.3■□□□□ 0.2
Cops3O88543 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops3O88543 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops3O88543 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cops3O88543 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cops3O88543 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cops3O88543 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cops3O88543 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cops3O88543 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops3O88543 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cops3O88543 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms