Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Vti1bO88384 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vti1bO88384 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Vti1bO88384 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Vti1bO88384 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Vti1bO88384 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vti1bO88384 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1bO88384 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1bO88384 Gm7860-201ENSMUST00000121190 879 ntBASIC17.39■□□□□ 0.37
Vti1bO88384 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.39■□□□□ 0.37
Vti1bO88384 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Vti1bO88384 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1bO88384 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1bO88384 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.39■□□□□ 0.37
Vti1bO88384 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1bO88384 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1bO88384 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1bO88384 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1bO88384 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1bO88384 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.38■□□□□ 0.37
Vti1bO88384 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1bO88384 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.38■□□□□ 0.37
Vti1bO88384 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1bO88384 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1bO88384 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1bO88384 Gm18284-201ENSMUST00000172604 624 ntBASIC17.38■□□□□ 0.37
Vti1bO88384 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.38■□□□□ 0.37
Vti1bO88384 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1bO88384 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1bO88384 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Vti1bO88384 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vti1bO88384 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Vti1bO88384 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.37■□□□□ 0.37
Vti1bO88384 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.37■□□□□ 0.37
Vti1bO88384 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.37■□□□□ 0.37
Vti1bO88384 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vti1bO88384 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vti1bO88384 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1bO88384 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.36■□□□□ 0.37
Vti1bO88384 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vti1bO88384 Gm5874-201ENSMUST00000096101 508 ntBASIC17.36■□□□□ 0.37
Vti1bO88384 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
Vti1bO88384 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.36■□□□□ 0.37
Vti1bO88384 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1bO88384 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.35■□□□□ 0.37
Vti1bO88384 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vti1bO88384 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.35■□□□□ 0.37
Vti1bO88384 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.35■□□□□ 0.37
Vti1bO88384 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.35■□□□□ 0.37
Vti1bO88384 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Reep4-203ENSMUST00000226563 1444 ntBASIC17.35■□□□□ 0.37
Vti1bO88384 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1bO88384 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.34■□□□□ 0.37
Vti1bO88384 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Vti1bO88384 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1bO88384 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vti1bO88384 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms