Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh16O88338 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh16O88338 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh16O88338 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cdh16O88338 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.88■□□□□ 0.45
Cdh16O88338 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh16O88338 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cdh16O88338 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh16O88338 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh16O88338 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh16O88338 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.87■□□□□ 0.45
Cdh16O88338 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh16O88338 Gm8969-201ENSMUST00000199694 526 ntBASIC17.87■□□□□ 0.45
Cdh16O88338 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Cdh16O88338 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh16O88338 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh16O88338 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh16O88338 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.86■□□□□ 0.45
Cdh16O88338 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Cdh16O88338 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh16O88338 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh16O88338 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh16O88338 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
Cdh16O88338 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.85■□□□□ 0.45
Cdh16O88338 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh16O88338 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh16O88338 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh16O88338 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh16O88338 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdh16O88338 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.84■□□□□ 0.45
Cdh16O88338 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.84■□□□□ 0.45
Cdh16O88338 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.84■□□□□ 0.45
Cdh16O88338 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Cdh16O88338 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cdh16O88338 Gm13241-201ENSMUST00000094493 780 ntBASIC17.84■□□□□ 0.45
Cdh16O88338 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cdh16O88338 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh16O88338 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh16O88338 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh16O88338 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh16O88338 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.83■□□□□ 0.44
Cdh16O88338 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh16O88338 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh16O88338 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh16O88338 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh16O88338 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cdh16O88338 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Cdh16O88338 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh16O88338 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cdh16O88338 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh16O88338 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh16O88338 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh16O88338 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh16O88338 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh16O88338 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.82■□□□□ 0.44
Cdh16O88338 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.82■□□□□ 0.44
Cdh16O88338 Gm43137-201ENSMUST00000198052 594 ntBASIC17.82■□□□□ 0.44
Cdh16O88338 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh16O88338 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.82■□□□□ 0.44
Cdh16O88338 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cdh16O88338 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh16O88338 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.82■□□□□ 0.44
Cdh16O88338 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh16O88338 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh16O88338 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh16O88338 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh16O88338 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh16O88338 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cdh16O88338 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh16O88338 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms