Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubr1O70481 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubr1O70481 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ubr1O70481 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC23.93■■□□□ 1.42
Ubr1O70481 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubr1O70481 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC23.93■■□□□ 1.42
Ubr1O70481 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubr1O70481 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC23.93■■□□□ 1.42
Ubr1O70481 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubr1O70481 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubr1O70481 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr1O70481 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC23.92■■□□□ 1.42
Ubr1O70481 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr1O70481 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr1O70481 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Ubr1O70481 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.92■■□□□ 1.42
Ubr1O70481 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr1O70481 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ubr1O70481 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr1O70481 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr1O70481 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr1O70481 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr1O70481 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr1O70481 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.91■■□□□ 1.42
Ubr1O70481 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ubr1O70481 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Ubr1O70481 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr1O70481 Gm45906-201ENSMUST00000208911 1430 ntBASIC23.9■■□□□ 1.42
Ubr1O70481 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr1O70481 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr1O70481 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr1O70481 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr1O70481 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr1O70481 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr1O70481 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC23.9■■□□□ 1.42
Ubr1O70481 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr1O70481 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubr1O70481 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ubr1O70481 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Ubr1O70481 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ubr1O70481 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ubr1O70481 Gm38308-201ENSMUST00000194934 1809 ntBASIC23.89■■□□□ 1.41
Ubr1O70481 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ubr1O70481 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ubr1O70481 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ubr1O70481 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC23.88■■□□□ 1.41
Ubr1O70481 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC23.88■■□□□ 1.41
Ubr1O70481 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ubr1O70481 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ubr1O70481 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ubr1O70481 Gm9885-202ENSMUST00000186234 2209 ntBASIC23.87■■□□□ 1.41
Ubr1O70481 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ubr1O70481 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Ubr1O70481 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ubr1O70481 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC23.87■■□□□ 1.41
Ubr1O70481 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ubr1O70481 Gm18032-201ENSMUST00000222541 538 ntBASIC23.86■■□□□ 1.41
Ubr1O70481 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr1O70481 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr1O70481 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr1O70481 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr1O70481 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr1O70481 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr1O70481 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr1O70481 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr1O70481 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubr1O70481 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ubr1O70481 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ubr1O70481 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ubr1O70481 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ubr1O70481 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC23.85■■□□□ 1.41
Ubr1O70481 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC23.85■■□□□ 1.41
Ubr1O70481 Gm6659-201ENSMUST00000174752 547 ntBASIC23.85■■□□□ 1.41
Ubr1O70481 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC23.85■■□□□ 1.41
Ubr1O70481 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
Ubr1O70481 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr1O70481 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.84■■□□□ 1.41
Ubr1O70481 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr1O70481 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr1O70481 Gm12085-201ENSMUST00000119263 940 ntBASIC23.84■■□□□ 1.41
Ubr1O70481 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Ubr1O70481 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC23.84■■□□□ 1.41
Ubr1O70481 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr1O70481 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr1O70481 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr1O70481 Gm43545-201ENSMUST00000196765 2779 ntBASIC23.84■■□□□ 1.41
Ubr1O70481 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr1O70481 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr1O70481 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ubr1O70481 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms