Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pknox1O70477 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pknox1O70477 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pknox1O70477 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pknox1O70477 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pknox1O70477 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pknox1O70477 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pknox1O70477 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pknox1O70477 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pknox1O70477 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pknox1O70477 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pknox1O70477 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.14■□□□□ 0.49
Pknox1O70477 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pknox1O70477 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pknox1O70477 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.14■□□□□ 0.49
Pknox1O70477 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.14■□□□□ 0.49
Pknox1O70477 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.14■□□□□ 0.49
Pknox1O70477 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.14■□□□□ 0.49
Pknox1O70477 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pknox1O70477 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pknox1O70477 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
Pknox1O70477 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pknox1O70477 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.14■□□□□ 0.49
Pknox1O70477 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pknox1O70477 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pknox1O70477 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pknox1O70477 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pknox1O70477 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pknox1O70477 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.13■□□□□ 0.49
Pknox1O70477 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pknox1O70477 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pknox1O70477 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pknox1O70477 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pknox1O70477 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pknox1O70477 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pknox1O70477 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pknox1O70477 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pknox1O70477 Gm13234-201ENSMUST00000120010 747 ntBASIC18.12■□□□□ 0.49
Pknox1O70477 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pknox1O70477 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pknox1O70477 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pknox1O70477 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pknox1O70477 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pknox1O70477 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.12■□□□□ 0.49
Pknox1O70477 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pknox1O70477 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pknox1O70477 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pknox1O70477 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pknox1O70477 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pknox1O70477 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pknox1O70477 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pknox1O70477 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pknox1O70477 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.11■□□□□ 0.49
Pknox1O70477 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.11■□□□□ 0.49
Pknox1O70477 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pknox1O70477 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pknox1O70477 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Pknox1O70477 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pknox1O70477 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pknox1O70477 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pknox1O70477 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pknox1O70477 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pknox1O70477 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pknox1O70477 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.1■□□□□ 0.49
Pknox1O70477 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pknox1O70477 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pknox1O70477 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.1■□□□□ 0.49
Pknox1O70477 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pknox1O70477 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pknox1O70477 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Pknox1O70477 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pknox1O70477 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pknox1O70477 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.09■□□□□ 0.49
Pknox1O70477 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.09■□□□□ 0.49
Pknox1O70477 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pknox1O70477 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pknox1O70477 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pknox1O70477 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Pknox1O70477 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pknox1O70477 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Pknox1O70477 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.08■□□□□ 0.49
Pknox1O70477 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pknox1O70477 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pknox1O70477 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pknox1O70477 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pknox1O70477 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Pknox1O70477 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pknox1O70477 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pknox1O70477 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pknox1O70477 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms