Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.01■□□□□ 0.47
Pdlim1O70400 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.01■□□□□ 0.47
Pdlim1O70400 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim1O70400 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim1O70400 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim1O70400 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim1O70400 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.01■□□□□ 0.47
Pdlim1O70400 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim1O70400 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim1O70400 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pdlim1O70400 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim1O70400 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Pdlim1O70400 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pdlim1O70400 Gm2559-201ENSMUST00000201323 363 ntBASIC18■□□□□ 0.47
Pdlim1O70400 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pdlim1O70400 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 Flg-201ENSMUST00000050758 1488 ntBASIC18■□□□□ 0.47
Pdlim1O70400 Gm38308-201ENSMUST00000194934 1809 ntBASIC18■□□□□ 0.47
Pdlim1O70400 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim1O70400 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim1O70400 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pdlim1O70400 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim1O70400 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim1O70400 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim1O70400 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pdlim1O70400 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim1O70400 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim1O70400 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.99■□□□□ 0.47
Pdlim1O70400 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.99■□□□□ 0.47
Pdlim1O70400 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.99■□□□□ 0.47
Pdlim1O70400 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.99■□□□□ 0.47
Pdlim1O70400 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim1O70400 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.99■□□□□ 0.47
Pdlim1O70400 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim1O70400 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim1O70400 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim1O70400 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.98■□□□□ 0.47
Pdlim1O70400 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim1O70400 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim1O70400 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim1O70400 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.98■□□□□ 0.47
Pdlim1O70400 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim1O70400 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim1O70400 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim1O70400 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pdlim1O70400 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim1O70400 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim1O70400 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim1O70400 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pdlim1O70400 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim1O70400 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim1O70400 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim1O70400 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim1O70400 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim1O70400 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.97■□□□□ 0.47
Pdlim1O70400 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.97■□□□□ 0.47
Pdlim1O70400 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim1O70400 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim1O70400 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.97■□□□□ 0.47
Pdlim1O70400 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pdlim1O70400 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim1O70400 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pdlim1O70400 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim1O70400 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pdlim1O70400 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Gm20049-201ENSMUST00000219950 730 ntBASIC17.96■□□□□ 0.47
Pdlim1O70400 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pdlim1O70400 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Dio3-201ENSMUST00000097228 1449 ntBASIC17.96■□□□□ 0.47
Pdlim1O70400 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim1O70400 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pdlim1O70400 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.95■□□□□ 0.46
Pdlim1O70400 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim1O70400 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms