Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChkbO55229 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ChkbO55229 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChkbO55229 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ChkbO55229 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.43■□□□□ 0.7
ChkbO55229 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkbO55229 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ChkbO55229 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkbO55229 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.43■□□□□ 0.7
ChkbO55229 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkbO55229 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkbO55229 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkbO55229 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.43■□□□□ 0.7
ChkbO55229 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChkbO55229 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChkbO55229 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChkbO55229 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChkbO55229 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ChkbO55229 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.42■□□□□ 0.7
ChkbO55229 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.42■□□□□ 0.7
ChkbO55229 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChkbO55229 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ChkbO55229 Gm5874-201ENSMUST00000096101 508 ntBASIC19.42■□□□□ 0.7
ChkbO55229 Fst-202ENSMUST00000223640 2612 ntBASIC19.42■□□□□ 0.7
ChkbO55229 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ChkbO55229 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.41■□□□□ 0.7
ChkbO55229 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 Gm8495-201ENSMUST00000188740 694 ntBASIC19.41■□□□□ 0.7
ChkbO55229 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.41■□□□□ 0.7
ChkbO55229 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkbO55229 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ChkbO55229 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkbO55229 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.4■□□□□ 0.7
ChkbO55229 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkbO55229 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkbO55229 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkbO55229 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkbO55229 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkbO55229 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ChkbO55229 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.4■□□□□ 0.7
ChkbO55229 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkbO55229 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
ChkbO55229 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ChkbO55229 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ChkbO55229 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ChkbO55229 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ChkbO55229 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ChkbO55229 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ChkbO55229 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.39■□□□□ 0.69
ChkbO55229 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ChkbO55229 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.39■□□□□ 0.69
ChkbO55229 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ChkbO55229 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ChkbO55229 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ChkbO55229 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ChkbO55229 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkbO55229 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ChkbO55229 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
ChkbO55229 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ChkbO55229 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ChkbO55229 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.38■□□□□ 0.69
ChkbO55229 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ChkbO55229 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkbO55229 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkbO55229 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ChkbO55229 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkbO55229 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.38■□□□□ 0.69
ChkbO55229 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkbO55229 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ChkbO55229 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.37■□□□□ 0.69
ChkbO55229 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ChkbO55229 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ChkbO55229 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
ChkbO55229 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms