Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Mtag2-201ENSMUST00000058665 714 ntBASIC18.99■□□□□ 0.63
Cldn5O54942 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.99■□□□□ 0.63
Cldn5O54942 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cldn5O54942 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn5O54942 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn5O54942 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn5O54942 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn5O54942 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn5O54942 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cldn5O54942 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn5O54942 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn5O54942 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn5O54942 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn5O54942 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cldn5O54942 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn5O54942 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn5O54942 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn5O54942 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn5O54942 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn5O54942 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn5O54942 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.97■□□□□ 0.63
Cldn5O54942 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn5O54942 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn5O54942 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.97■□□□□ 0.63
Cldn5O54942 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn5O54942 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cldn5O54942 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn5O54942 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn5O54942 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.96■□□□□ 0.63
Cldn5O54942 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn5O54942 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.96■□□□□ 0.63
Cldn5O54942 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
Cldn5O54942 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn5O54942 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn5O54942 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn5O54942 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn5O54942 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn5O54942 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.95■□□□□ 0.62
Cldn5O54942 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.95■□□□□ 0.62
Cldn5O54942 Zfp783-201ENSMUST00000095946 670 ntBASIC18.95■□□□□ 0.62
Cldn5O54942 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn5O54942 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn5O54942 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cldn5O54942 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn5O54942 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn5O54942 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn5O54942 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn5O54942 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn5O54942 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn5O54942 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.94■□□□□ 0.62
Cldn5O54942 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn5O54942 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cldn5O54942 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn5O54942 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.94■□□□□ 0.62
Cldn5O54942 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn5O54942 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn5O54942 Gm10812-201ENSMUST00000099864 546 ntBASIC18.94■□□□□ 0.62
Cldn5O54942 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn5O54942 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn5O54942 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn5O54942 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn5O54942 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.94■□□□□ 0.62
Cldn5O54942 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn5O54942 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn5O54942 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn5O54942 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.93■□□□□ 0.62
Cldn5O54942 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn5O54942 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.93■□□□□ 0.62
Cldn5O54942 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cldn5O54942 Gm38285-201ENSMUST00000192928 922 ntBASIC18.93■□□□□ 0.62
Cldn5O54942 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn5O54942 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn5O54942 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.93■□□□□ 0.62
Cldn5O54942 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn5O54942 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn5O54942 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn5O54942 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn5O54942 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cldn5O54942 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn5O54942 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn5O54942 Gm13158-201ENSMUST00000122007 736 ntBASIC18.92■□□□□ 0.62
Cldn5O54942 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn5O54942 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.92■□□□□ 0.62
Cldn5O54942 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn5O54942 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cldn5O54942 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn5O54942 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn5O54942 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn5O54942 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn5O54942 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn5O54942 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.91■□□□□ 0.62
Cldn5O54942 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn5O54942 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn5O54942 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn5O54942 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.91■□□□□ 0.62
Cldn5O54942 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn5O54942 Gm10698-201ENSMUST00000182663 604 ntBASIC18.91■□□□□ 0.62
Cldn5O54942 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.91■□□□□ 0.62
Cldn5O54942 Gm18666-201ENSMUST00000190039 958 ntBASIC18.91■□□□□ 0.62
Cldn5O54942 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms