Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarce1O54941 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Smarce1O54941 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.74■■□□□ 1.07
Smarce1O54941 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.74■■□□□ 1.07
Smarce1O54941 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Smarce1O54941 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Smarce1O54941 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarce1O54941 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarce1O54941 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarce1O54941 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarce1O54941 Gm13146-201ENSMUST00000118508 780 ntBASIC21.73■■□□□ 1.07
Smarce1O54941 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Smarce1O54941 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarce1O54941 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarce1O54941 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarce1O54941 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.73■■□□□ 1.07
Smarce1O54941 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarce1O54941 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smarce1O54941 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Smarce1O54941 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Smarce1O54941 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarce1O54941 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.72■■□□□ 1.07
Smarce1O54941 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarce1O54941 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smarce1O54941 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smarce1O54941 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smarce1O54941 Gm9988-201ENSMUST00000069786 435 ntBASIC21.72■■□□□ 1.07
Smarce1O54941 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarce1O54941 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smarce1O54941 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Smarce1O54941 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Smarce1O54941 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarce1O54941 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarce1O54941 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarce1O54941 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smarce1O54941 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarce1O54941 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarce1O54941 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Smarce1O54941 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smarce1O54941 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.71■■□□□ 1.07
Smarce1O54941 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.71■■□□□ 1.07
Smarce1O54941 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarce1O54941 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Smarce1O54941 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarce1O54941 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarce1O54941 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Smarce1O54941 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarce1O54941 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.7■■□□□ 1.06
Smarce1O54941 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Smarce1O54941 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.7■■□□□ 1.06
Smarce1O54941 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Smarce1O54941 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarce1O54941 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarce1O54941 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarce1O54941 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.7■■□□□ 1.06
Smarce1O54941 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarce1O54941 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.7■■□□□ 1.06
Smarce1O54941 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Smarce1O54941 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Smarce1O54941 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarce1O54941 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
Smarce1O54941 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarce1O54941 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC21.69■■□□□ 1.06
Smarce1O54941 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarce1O54941 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.69■■□□□ 1.06
Smarce1O54941 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarce1O54941 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarce1O54941 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarce1O54941 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarce1O54941 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smarce1O54941 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Smarce1O54941 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarce1O54941 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.68■■□□□ 1.06
Smarce1O54941 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Smarce1O54941 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.68■■□□□ 1.06
Smarce1O54941 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Smarce1O54941 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarce1O54941 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarce1O54941 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarce1O54941 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarce1O54941 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarce1O54941 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Smarce1O54941 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Smarce1O54941 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarce1O54941 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarce1O54941 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarce1O54941 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.67■■□□□ 1.06
Smarce1O54941 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarce1O54941 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms