Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abca4O35600 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abca4O35600 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abca4O35600 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abca4O35600 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.22■□□□□ 0.35
Abca4O35600 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 Gm13474-201ENSMUST00000122466 815 ntBASIC17.22■□□□□ 0.35
Abca4O35600 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Abca4O35600 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abca4O35600 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.22■□□□□ 0.35
Abca4O35600 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Abca4O35600 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Gm43347-201ENSMUST00000200226 580 ntBASIC17.21■□□□□ 0.35
Abca4O35600 Gm2651-201ENSMUST00000203560 838 ntBASIC17.21■□□□□ 0.35
Abca4O35600 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.21■□□□□ 0.35
Abca4O35600 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Abca4O35600 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Abca4O35600 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.2■□□□□ 0.34
Abca4O35600 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abca4O35600 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abca4O35600 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abca4O35600 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Abca4O35600 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Abca4O35600 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Abca4O35600 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Abca4O35600 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abca4O35600 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.2■□□□□ 0.34
Abca4O35600 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.2■□□□□ 0.34
Abca4O35600 Gm18195-201ENSMUST00000207604 706 ntBASIC17.2■□□□□ 0.34
Abca4O35600 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abca4O35600 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.19■□□□□ 0.34
Abca4O35600 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Abca4O35600 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.19■□□□□ 0.34
Abca4O35600 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Abca4O35600 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Abca4O35600 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Abca4O35600 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca4O35600 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca4O35600 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca4O35600 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.19■□□□□ 0.34
Abca4O35600 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca4O35600 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca4O35600 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca4O35600 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca4O35600 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Abca4O35600 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abca4O35600 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Abca4O35600 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abca4O35600 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abca4O35600 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Abca4O35600 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Abca4O35600 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abca4O35600 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abca4O35600 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abca4O35600 Gm27389-201ENSMUST00000183622 195 ntBASIC17.18■□□□□ 0.34
Abca4O35600 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.18■□□□□ 0.34
Abca4O35600 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Abca4O35600 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Abca4O35600 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Abca4O35600 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Abca4O35600 Gm27742-201ENSMUST00000184667 60 ntBASIC17.17■□□□□ 0.34
Abca4O35600 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.17■□□□□ 0.34
Abca4O35600 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abca4O35600 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abca4O35600 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abca4O35600 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abca4O35600 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.17■□□□□ 0.34
Abca4O35600 Gm11950-201ENSMUST00000121615 838 ntBASIC17.16■□□□□ 0.34
Abca4O35600 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.16■□□□□ 0.34
Abca4O35600 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Abca4O35600 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca4O35600 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca4O35600 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca4O35600 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abca4O35600 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.16■□□□□ 0.34
Abca4O35600 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.16■□□□□ 0.34
Abca4O35600 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.15■□□□□ 0.34
Abca4O35600 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms