Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Clk4O35493 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Clk4O35493 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Clk4O35493 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.48■□□□□ 0.39
Clk4O35493 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.48■□□□□ 0.39
Clk4O35493 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.48■□□□□ 0.39
Clk4O35493 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.48■□□□□ 0.39
Clk4O35493 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Clk4O35493 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.48■□□□□ 0.39
Clk4O35493 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.48■□□□□ 0.39
Clk4O35493 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clk4O35493 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Clk4O35493 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.47■□□□□ 0.39
Clk4O35493 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.47■□□□□ 0.39
Clk4O35493 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk4O35493 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Clk4O35493 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk4O35493 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk4O35493 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Clk4O35493 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clk4O35493 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk4O35493 Gm10602-201ENSMUST00000098239 609 ntBASIC17.47■□□□□ 0.39
Clk4O35493 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk4O35493 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk4O35493 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Clk4O35493 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clk4O35493 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Clk4O35493 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 Gm6211-202ENSMUST00000167849 925 ntBASIC17.46■□□□□ 0.39
Clk4O35493 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.46■□□□□ 0.39
Clk4O35493 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk4O35493 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.46■□□□□ 0.38
Clk4O35493 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Clk4O35493 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Clk4O35493 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Clk4O35493 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Clk4O35493 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.45■□□□□ 0.38
Clk4O35493 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.45■□□□□ 0.38
Clk4O35493 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Clk4O35493 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Clk4O35493 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk4O35493 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk4O35493 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk4O35493 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clk4O35493 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clk4O35493 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clk4O35493 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk4O35493 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.44■□□□□ 0.38
Clk4O35493 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk4O35493 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clk4O35493 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk4O35493 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.43■□□□□ 0.38
Clk4O35493 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Clk4O35493 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Clk4O35493 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Clk4O35493 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Clk4O35493 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.43■□□□□ 0.38
Clk4O35493 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk4O35493 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms