Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clk3O35492 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clk3O35492 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Clk3O35492 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk3O35492 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clk3O35492 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.37■□□□□ 0.37
Clk3O35492 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk3O35492 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk3O35492 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clk3O35492 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Clk3O35492 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk3O35492 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk3O35492 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk3O35492 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Clk3O35492 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.36■□□□□ 0.37
Clk3O35492 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Clk3O35492 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Clk3O35492 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Gm18284-201ENSMUST00000172604 624 ntBASIC17.36■□□□□ 0.37
Clk3O35492 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.36■□□□□ 0.37
Clk3O35492 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.36■□□□□ 0.37
Clk3O35492 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.36■□□□□ 0.37
Clk3O35492 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Clk3O35492 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Clk3O35492 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clk3O35492 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk3O35492 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk3O35492 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk3O35492 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk3O35492 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk3O35492 Gm18671-201ENSMUST00000214826 683 ntBASIC17.35■□□□□ 0.37
Clk3O35492 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.35■□□□□ 0.37
Clk3O35492 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Clk3O35492 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clk3O35492 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.35■□□□□ 0.37
Clk3O35492 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clk3O35492 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk3O35492 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clk3O35492 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Clk3O35492 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clk3O35492 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk3O35492 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.34■□□□□ 0.37
Clk3O35492 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clk3O35492 Gm13234-201ENSMUST00000120010 747 ntBASIC17.34■□□□□ 0.37
Clk3O35492 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.34■□□□□ 0.37
Clk3O35492 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clk3O35492 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk3O35492 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk3O35492 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clk3O35492 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clk3O35492 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk3O35492 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clk3O35492 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Clk3O35492 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clk3O35492 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.33■□□□□ 0.37
Clk3O35492 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Clk3O35492 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clk3O35492 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk3O35492 Reep4-203ENSMUST00000226563 1444 ntBASIC17.33■□□□□ 0.36
Clk3O35492 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk3O35492 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk3O35492 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk3O35492 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Clk3O35492 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clk3O35492 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk3O35492 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Clk3O35492 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk3O35492 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk3O35492 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk3O35492 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clk3O35492 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Clk3O35492 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk3O35492 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Clk3O35492 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk3O35492 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clk3O35492 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clk3O35492 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Clk3O35492 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk3O35492 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.32■□□□□ 0.36
Clk3O35492 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
Clk3O35492 Gm8495-201ENSMUST00000188740 694 ntBASIC17.32■□□□□ 0.36
Clk3O35492 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Clk3O35492 Gm42642-201ENSMUST00000200683 355 ntBASIC17.32■□□□□ 0.36
Clk3O35492 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk3O35492 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk3O35492 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk3O35492 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clk3O35492 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk3O35492 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clk3O35492 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk3O35492 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms