Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col15a1O35206 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col15a1O35206 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Col15a1O35206 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col15a1O35206 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col15a1O35206 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Col15a1O35206 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.59■■□□□ 1.37
Col15a1O35206 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col15a1O35206 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col15a1O35206 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Col15a1O35206 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC23.58■■□□□ 1.37
Col15a1O35206 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col15a1O35206 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col15a1O35206 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col15a1O35206 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col15a1O35206 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col15a1O35206 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col15a1O35206 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col15a1O35206 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col15a1O35206 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col15a1O35206 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Col15a1O35206 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC23.56■■□□□ 1.36
Col15a1O35206 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col15a1O35206 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC23.56■■□□□ 1.36
Col15a1O35206 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col15a1O35206 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col15a1O35206 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col15a1O35206 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Col15a1O35206 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col15a1O35206 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col15a1O35206 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Col15a1O35206 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Col15a1O35206 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Col15a1O35206 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col15a1O35206 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col15a1O35206 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Col15a1O35206 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col15a1O35206 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col15a1O35206 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC23.54■■□□□ 1.36
Col15a1O35206 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
Col15a1O35206 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col15a1O35206 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col15a1O35206 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col15a1O35206 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col15a1O35206 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC23.53■■□□□ 1.36
Col15a1O35206 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col15a1O35206 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Col15a1O35206 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Col15a1O35206 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col15a1O35206 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Col15a1O35206 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC23.53■■□□□ 1.36
Col15a1O35206 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col15a1O35206 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Col15a1O35206 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC23.52■■□□□ 1.36
Col15a1O35206 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Col15a1O35206 Gm18032-201ENSMUST00000222541 538 ntBASIC23.52■■□□□ 1.36
Col15a1O35206 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col15a1O35206 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col15a1O35206 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Col15a1O35206 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col15a1O35206 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col15a1O35206 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC23.52■■□□□ 1.36
Col15a1O35206 AC159205.6-201ENSMUST00000224935 887 ntBASIC23.52■■□□□ 1.36
Col15a1O35206 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.35
Col15a1O35206 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col15a1O35206 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Col15a1O35206 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Col15a1O35206 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Col15a1O35206 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Col15a1O35206 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Col15a1O35206 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Col15a1O35206 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Col15a1O35206 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC23.51■■□□□ 1.35
Col15a1O35206 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col15a1O35206 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC23.51■■□□□ 1.35
Col15a1O35206 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col15a1O35206 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC23.5■■□□□ 1.35
Col15a1O35206 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
Col15a1O35206 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col15a1O35206 Gm12085-201ENSMUST00000119263 940 ntBASIC23.5■■□□□ 1.35
Col15a1O35206 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Col15a1O35206 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC23.5■■□□□ 1.35
Col15a1O35206 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC23.5■■□□□ 1.35
Col15a1O35206 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC23.5■■□□□ 1.35
Col15a1O35206 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col15a1O35206 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC23.5■■□□□ 1.35
Col15a1O35206 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.5■■□□□ 1.35
Col15a1O35206 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col15a1O35206 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col15a1O35206 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col15a1O35206 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col15a1O35206 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Col15a1O35206 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col15a1O35206 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col15a1O35206 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.49■■□□□ 1.35
Col15a1O35206 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Col15a1O35206 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col15a1O35206 Gm18959-201ENSMUST00000208954 655 ntBASIC23.49■■□□□ 1.35
Col15a1O35206 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Col15a1O35206 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms