Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Ebf3O08791 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.9■□□□□ 0.62
Ebf3O08791 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.9■□□□□ 0.62
Ebf3O08791 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf3O08791 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ebf3O08791 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Ebf3O08791 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.89■□□□□ 0.62
Ebf3O08791 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ebf3O08791 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Gm15378-201ENSMUST00000121894 207 ntBASIC18.89■□□□□ 0.61
Ebf3O08791 Gm7977-201ENSMUST00000193787 748 ntBASIC18.89■□□□□ 0.61
Ebf3O08791 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.89■□□□□ 0.61
Ebf3O08791 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ebf3O08791 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf3O08791 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf3O08791 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf3O08791 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf3O08791 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf3O08791 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ebf3O08791 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Ebf3O08791 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf3O08791 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf3O08791 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf3O08791 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ebf3O08791 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf3O08791 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ebf3O08791 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf3O08791 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf3O08791 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.88■□□□□ 0.61
Ebf3O08791 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Gm13158-201ENSMUST00000122007 736 ntBASIC18.87■□□□□ 0.61
Ebf3O08791 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ebf3O08791 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ebf3O08791 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.87■□□□□ 0.61
Ebf3O08791 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ebf3O08791 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ebf3O08791 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ebf3O08791 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf3O08791 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.86■□□□□ 0.61
Ebf3O08791 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf3O08791 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf3O08791 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ebf3O08791 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf3O08791 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf3O08791 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf3O08791 Gm13836-201ENSMUST00000121159 501 ntBASIC18.86■□□□□ 0.61
Ebf3O08791 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf3O08791 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.86■□□□□ 0.61
Ebf3O08791 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.86■□□□□ 0.61
Ebf3O08791 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.86■□□□□ 0.61
Ebf3O08791 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf3O08791 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf3O08791 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf3O08791 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ebf3O08791 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.86■□□□□ 0.61
Ebf3O08791 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.86■□□□□ 0.61
Ebf3O08791 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms