Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ClockO08785 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.33■□□□□ 0.36
ClockO08785 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.33■□□□□ 0.36
ClockO08785 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ClockO08785 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClockO08785 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClockO08785 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClockO08785 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.33■□□□□ 0.36
ClockO08785 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClockO08785 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClockO08785 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClockO08785 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClockO08785 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ClockO08785 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClockO08785 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClockO08785 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClockO08785 Gm12922-201ENSMUST00000120626 809 ntBASIC17.32■□□□□ 0.36
ClockO08785 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.32■□□□□ 0.36
ClockO08785 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClockO08785 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ClockO08785 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClockO08785 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClockO08785 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ClockO08785 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.31■□□□□ 0.36
ClockO08785 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.31■□□□□ 0.36
ClockO08785 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ClockO08785 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
ClockO08785 Golgb1-201ENSMUST00000023534 498 ntBASIC17.31■□□□□ 0.36
ClockO08785 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.31■□□□□ 0.36
ClockO08785 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClockO08785 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.3■□□□□ 0.36
ClockO08785 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.3■□□□□ 0.36
ClockO08785 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.3■□□□□ 0.36
ClockO08785 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ClockO08785 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.3■□□□□ 0.36
ClockO08785 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.3■□□□□ 0.36
ClockO08785 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.3■□□□□ 0.36
ClockO08785 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClockO08785 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.29■□□□□ 0.36
ClockO08785 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.29■□□□□ 0.36
ClockO08785 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ClockO08785 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ClockO08785 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.29■□□□□ 0.36
ClockO08785 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
ClockO08785 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ClockO08785 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClockO08785 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ClockO08785 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
ClockO08785 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ClockO08785 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.28■□□□□ 0.36
ClockO08785 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClockO08785 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms