Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim22J3QP37 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim22J3QP37 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim22J3QP37 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim22J3QP37 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim22J3QP37 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.22■□□□□ 0.51
Smim22J3QP37 Gm27357-201ENSMUST00000183754 135 ntBASIC18.22■□□□□ 0.51
Smim22J3QP37 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim22J3QP37 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim22J3QP37 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim22J3QP37 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.21■□□□□ 0.51
Smim22J3QP37 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smim22J3QP37 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.21■□□□□ 0.51
Smim22J3QP37 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.21■□□□□ 0.51
Smim22J3QP37 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.21■□□□□ 0.51
Smim22J3QP37 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim22J3QP37 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smim22J3QP37 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.2■□□□□ 0.5
Smim22J3QP37 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Smim22J3QP37 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.2■□□□□ 0.5
Smim22J3QP37 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.2■□□□□ 0.5
Smim22J3QP37 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Smim22J3QP37 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.2■□□□□ 0.5
Smim22J3QP37 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smim22J3QP37 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Smim22J3QP37 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim22J3QP37 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim22J3QP37 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smim22J3QP37 Gm9013-201ENSMUST00000132939 882 ntBASIC18.19■□□□□ 0.5
Smim22J3QP37 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smim22J3QP37 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim22J3QP37 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim22J3QP37 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim22J3QP37 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smim22J3QP37 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim22J3QP37 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smim22J3QP37 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim22J3QP37 Flg-201ENSMUST00000050758 1488 ntBASIC18.19■□□□□ 0.5
Smim22J3QP37 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim22J3QP37 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim22J3QP37 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Smim22J3QP37 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim22J3QP37 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smim22J3QP37 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.18■□□□□ 0.5
Smim22J3QP37 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.18■□□□□ 0.5
Smim22J3QP37 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Smim22J3QP37 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.18■□□□□ 0.5
Smim22J3QP37 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smim22J3QP37 Gm43575-201ENSMUST00000196420 516 ntBASIC18.18■□□□□ 0.5
Smim22J3QP37 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim22J3QP37 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim22J3QP37 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.18■□□□□ 0.5
Smim22J3QP37 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim22J3QP37 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim22J3QP37 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim22J3QP37 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smim22J3QP37 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Smim22J3QP37 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim22J3QP37 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Smim22J3QP37 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim22J3QP37 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smim22J3QP37 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.17■□□□□ 0.5
Smim22J3QP37 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim22J3QP37 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.17■□□□□ 0.5
Smim22J3QP37 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim22J3QP37 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim22J3QP37 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smim22J3QP37 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim22J3QP37 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim22J3QP37 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim22J3QP37 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Smim22J3QP37 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smim22J3QP37 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smim22J3QP37 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smim22J3QP37 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim22J3QP37 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms