Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh9F8VPK8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh9F8VPK8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh9F8VPK8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh9F8VPK8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh9F8VPK8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh9F8VPK8 Tgds-204ENSMUST00000228543 1594 ntBASIC18.72■□□□□ 0.59
Pcdh9F8VPK8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh9F8VPK8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Gm13234-201ENSMUST00000120010 747 ntBASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh9F8VPK8 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdh9F8VPK8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdh9F8VPK8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh9F8VPK8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh9F8VPK8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdh9F8VPK8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Pcdh9F8VPK8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh9F8VPK8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh9F8VPK8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh9F8VPK8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh9F8VPK8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh9F8VPK8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh9F8VPK8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms