Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm1E9Q9Q2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm1E9Q9Q2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm1E9Q9Q2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
R3hdm1E9Q9Q2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.08■□□□□ 0.8
R3hdm1E9Q9Q2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
R3hdm1E9Q9Q2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
R3hdm1E9Q9Q2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm1E9Q9Q2 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3hdm1E9Q9Q2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3hdm1E9Q9Q2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3hdm1E9Q9Q2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3hdm1E9Q9Q2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3hdm1E9Q9Q2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 1797.2 ms