Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Gm5417-201ENSMUST00000079706 384 ntBASIC22.06■■□□□ 1.12
Ube4aE9Q735 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.06■■□□□ 1.12
Ube4aE9Q735 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube4aE9Q735 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Ube4aE9Q735 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ube4aE9Q735 Gm16042-201ENSMUST00000204813 1247 ntBASIC22.05■■□□□ 1.12
Ube4aE9Q735 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ube4aE9Q735 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ube4aE9Q735 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ube4aE9Q735 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ube4aE9Q735 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.04■■□□□ 1.12
Ube4aE9Q735 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube4aE9Q735 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube4aE9Q735 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ube4aE9Q735 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ube4aE9Q735 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube4aE9Q735 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube4aE9Q735 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube4aE9Q735 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.04■■□□□ 1.12
Ube4aE9Q735 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube4aE9Q735 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.03■■□□□ 1.12
Ube4aE9Q735 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ube4aE9Q735 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ube4aE9Q735 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.03■■□□□ 1.12
Ube4aE9Q735 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ube4aE9Q735 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ube4aE9Q735 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ube4aE9Q735 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ube4aE9Q735 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ube4aE9Q735 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ube4aE9Q735 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ube4aE9Q735 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ube4aE9Q735 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ube4aE9Q735 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ube4aE9Q735 Gm11643-201ENSMUST00000119578 864 ntBASIC22.02■■□□□ 1.12
Ube4aE9Q735 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ube4aE9Q735 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ube4aE9Q735 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC22.02■■□□□ 1.12
Ube4aE9Q735 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ube4aE9Q735 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ube4aE9Q735 BC021767-201ENSMUST00000126387 1716 ntBASIC22.02■■□□□ 1.12
Ube4aE9Q735 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ube4aE9Q735 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.02■■□□□ 1.11
Ube4aE9Q735 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ube4aE9Q735 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ube4aE9Q735 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.01■■□□□ 1.11
Ube4aE9Q735 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ube4aE9Q735 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ube4aE9Q735 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ube4aE9Q735 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ube4aE9Q735 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ube4aE9Q735 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ube4aE9Q735 Gm45906-201ENSMUST00000208911 1430 ntBASIC22■■□□□ 1.11
Ube4aE9Q735 Gm9194-201ENSMUST00000220749 1447 ntBASIC22■■□□□ 1.11
Ube4aE9Q735 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Ube4aE9Q735 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
Ube4aE9Q735 Gm10654-201ENSMUST00000098653 1633 ntBASIC22■■□□□ 1.11
Ube4aE9Q735 Gm12382-201ENSMUST00000122005 922 ntBASIC22■■□□□ 1.11
Ube4aE9Q735 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ube4aE9Q735 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC22■■□□□ 1.11
Ube4aE9Q735 Arhgef4-208ENSMUST00000211073 171 ntBASIC22■■□□□ 1.11
Ube4aE9Q735 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Ube4aE9Q735 Gm9987-201ENSMUST00000069768 567 ntBASIC22■■□□□ 1.11
Ube4aE9Q735 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ube4aE9Q735 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ube4aE9Q735 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ube4aE9Q735 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Ube4aE9Q735 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.99■■□□□ 1.11
Ube4aE9Q735 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.99■■□□□ 1.11
Ube4aE9Q735 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ube4aE9Q735 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ube4aE9Q735 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.99■■□□□ 1.11
Ube4aE9Q735 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ube4aE9Q735 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.98■■□□□ 1.11
Ube4aE9Q735 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ube4aE9Q735 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ube4aE9Q735 Mir2861-201ENSMUST00000175539 82 ntBASIC21.98■■□□□ 1.11
Ube4aE9Q735 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ube4aE9Q735 Gm43799-201ENSMUST00000201845 579 ntBASIC21.98■■□□□ 1.11
Ube4aE9Q735 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ube4aE9Q735 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.98■■□□□ 1.11
Ube4aE9Q735 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms