Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd4B9EKX1 Gm42545-201ENSMUST00000202755 922 ntBASIC19.67■□□□□ 0.74
Ptchd4B9EKX1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd4B9EKX1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd4B9EKX1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd4B9EKX1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd4B9EKX1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.66■□□□□ 0.74
Ptchd4B9EKX1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Gm7977-201ENSMUST00000193787 748 ntBASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ptchd4B9EKX1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
Ptchd4B9EKX1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ptchd4B9EKX1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Ptchd4B9EKX1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ptchd4B9EKX1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd4B9EKX1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Mir6349-201ENSMUST00000184059 97 ntBASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Gm37292-201ENSMUST00000192062 758 ntBASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ptchd4B9EKX1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd4B9EKX1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms