Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.24■□□□□ 0.99
Clrn2B2RVW2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.24■□□□□ 0.99
Clrn2B2RVW2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.24■□□□□ 0.99
Clrn2B2RVW2 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.24■□□□□ 0.99
Clrn2B2RVW2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clrn2B2RVW2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Gm13559-201ENSMUST00000120476 863 ntBASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Gm12382-201ENSMUST00000122005 922 ntBASIC21.23■□□□□ 0.99
Clrn2B2RVW2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clrn2B2RVW2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clrn2B2RVW2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Clrn2B2RVW2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clrn2B2RVW2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clrn2B2RVW2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clrn2B2RVW2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.22■□□□□ 0.99
Clrn2B2RVW2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clrn2B2RVW2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Clrn2B2RVW2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clrn2B2RVW2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.2■□□□□ 0.98
Clrn2B2RVW2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clrn2B2RVW2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.2■□□□□ 0.98
Clrn2B2RVW2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clrn2B2RVW2 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.2■□□□□ 0.98
Clrn2B2RVW2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clrn2B2RVW2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clrn2B2RVW2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Gm7889-201ENSMUST00000185591 958 ntBASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Gm3375-201ENSMUST00000203929 796 ntBASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clrn2B2RVW2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Timm23-208ENSMUST00000226683 750 ntBASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clrn2B2RVW2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.17■□□□□ 0.98
Clrn2B2RVW2 Odf3b-204ENSMUST00000227834 930 ntBASIC21.17■□□□□ 0.98
Clrn2B2RVW2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Clrn2B2RVW2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.17■□□□□ 0.98
Clrn2B2RVW2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Clrn2B2RVW2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clrn2B2RVW2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clrn2B2RVW2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clrn2B2RVW2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clrn2B2RVW2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clrn2B2RVW2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.16■□□□□ 0.98
Clrn2B2RVW2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clrn2B2RVW2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Clrn2B2RVW2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clrn2B2RVW2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clrn2B2RVW2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clrn2B2RVW2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clrn2B2RVW2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms