Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Usp42B2RQC2 Tgds-204ENSMUST00000228543 1594 ntBASIC21.41■■□□□ 1.02
Usp42B2RQC2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Usp42B2RQC2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.41■■□□□ 1.02
Usp42B2RQC2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Usp42B2RQC2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Usp42B2RQC2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Usp42B2RQC2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Usp42B2RQC2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.39■■□□□ 1.01
Usp42B2RQC2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Usp42B2RQC2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Gm12441-201ENSMUST00000121806 588 ntBASIC21.38■■□□□ 1.01
Usp42B2RQC2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp42B2RQC2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp42B2RQC2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp42B2RQC2 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.37■■□□□ 1.01
Usp42B2RQC2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Usp42B2RQC2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Usp42B2RQC2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp42B2RQC2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Usp42B2RQC2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp42B2RQC2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp42B2RQC2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp42B2RQC2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp42B2RQC2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp42B2RQC2 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.36■■□□□ 1.01
Usp42B2RQC2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Usp42B2RQC2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Usp42B2RQC2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Usp42B2RQC2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Usp42B2RQC2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp42B2RQC2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.36■■□□□ 1.01
Usp42B2RQC2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Usp42B2RQC2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp42B2RQC2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp42B2RQC2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Usp42B2RQC2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.35■■□□□ 1.01
Usp42B2RQC2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.35■■□□□ 1.01
Usp42B2RQC2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp42B2RQC2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp42B2RQC2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.35■■□□□ 1.01
Usp42B2RQC2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp42B2RQC2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.35■■□□□ 1.01
Usp42B2RQC2 Fst-202ENSMUST00000223640 2612 ntBASIC21.35■■□□□ 1.01
Usp42B2RQC2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp42B2RQC2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Usp42B2RQC2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp42B2RQC2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp42B2RQC2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.34■■□□□ 1.01
Usp42B2RQC2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Usp42B2RQC2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp42B2RQC2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp42B2RQC2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp42B2RQC2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp42B2RQC2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp42B2RQC2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp42B2RQC2 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.33■■□□□ 1.01
Usp42B2RQC2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Usp42B2RQC2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.33■■□□□ 1.01
Usp42B2RQC2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms