Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gm43213-201ENSMUST00000151866 1790 ntBASIC23.87■■□□□ 1.41
Scn7aB1AYL1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scn7aB1AYL1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scn7aB1AYL1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scn7aB1AYL1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scn7aB1AYL1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.86■■□□□ 1.41
Scn7aB1AYL1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Scn7aB1AYL1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC23.86■■□□□ 1.41
Scn7aB1AYL1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn7aB1AYL1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn7aB1AYL1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn7aB1AYL1 Gm38308-201ENSMUST00000194934 1809 ntBASIC23.86■■□□□ 1.41
Scn7aB1AYL1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC23.86■■□□□ 1.41
Scn7aB1AYL1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn7aB1AYL1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scn7aB1AYL1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scn7aB1AYL1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scn7aB1AYL1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scn7aB1AYL1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scn7aB1AYL1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Scn7aB1AYL1 Gm9885-202ENSMUST00000186234 2209 ntBASIC23.83■■□□□ 1.41
Scn7aB1AYL1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scn7aB1AYL1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scn7aB1AYL1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Scn7aB1AYL1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.83■■□□□ 1.4
Scn7aB1AYL1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC23.83■■□□□ 1.4
Scn7aB1AYL1 Gm18032-201ENSMUST00000222541 538 ntBASIC23.83■■□□□ 1.4
Scn7aB1AYL1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Scn7aB1AYL1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn7aB1AYL1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.82■■□□□ 1.4
Scn7aB1AYL1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn7aB1AYL1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn7aB1AYL1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn7aB1AYL1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC23.81■■□□□ 1.4
Scn7aB1AYL1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Scn7aB1AYL1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn7aB1AYL1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC23.81■■□□□ 1.4
Scn7aB1AYL1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scn7aB1AYL1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scn7aB1AYL1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC23.8■■□□□ 1.4
Scn7aB1AYL1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn7aB1AYL1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC23.8■■□□□ 1.4
Scn7aB1AYL1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn7aB1AYL1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn7aB1AYL1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn7aB1AYL1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn7aB1AYL1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn7aB1AYL1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn7aB1AYL1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scn7aB1AYL1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC23.79■■□□□ 1.4
Scn7aB1AYL1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scn7aB1AYL1 Gm7856-201ENSMUST00000117514 1493 ntBASIC23.79■■□□□ 1.4
Scn7aB1AYL1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn7aB1AYL1 Gm13401-201ENSMUST00000117074 291 ntBASIC23.79■■□□□ 1.4
Scn7aB1AYL1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Scn7aB1AYL1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC23.79■■□□□ 1.4
Scn7aB1AYL1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Scn7aB1AYL1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn7aB1AYL1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn7aB1AYL1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn7aB1AYL1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn7aB1AYL1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn7aB1AYL1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn7aB1AYL1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Scn7aB1AYL1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Scn7aB1AYL1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Scn7aB1AYL1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Scn7aB1AYL1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Scn7aB1AYL1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC23.76■■□□□ 1.39
Scn7aB1AYL1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn7aB1AYL1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn7aB1AYL1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms