Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Col6a4A2AX52 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Col6a4A2AX52 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a4A2AX52 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Col6a4A2AX52 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a4A2AX52 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a4A2AX52 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a4A2AX52 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a4A2AX52 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.36■□□□□ 0.05
Col6a4A2AX52 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a4A2AX52 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a4A2AX52 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.36■□□□□ 0.05
Col6a4A2AX52 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a4A2AX52 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.35■□□□□ 0.05
Col6a4A2AX52 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a4A2AX52 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.34■□□□□ 0.05
Col6a4A2AX52 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a4A2AX52 Gm15375-201ENSMUST00000119510 849 ntBASIC15.33■□□□□ 0.05
Col6a4A2AX52 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a4A2AX52 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.33■□□□□ 0.05
Col6a4A2AX52 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a4A2AX52 Gm18032-201ENSMUST00000222541 538 ntBASIC15.33■□□□□ 0.05
Col6a4A2AX52 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.33■□□□□ 0.05
Col6a4A2AX52 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.33■□□□□ 0.04
Col6a4A2AX52 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Gm3375-201ENSMUST00000203929 796 ntBASIC15.32■□□□□ 0.04
Col6a4A2AX52 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Col6a4A2AX52 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.32■□□□□ 0.04
Col6a4A2AX52 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col6a4A2AX52 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms