Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
Ubr4A2AN08 AA386476-201ENSMUST00000098781 1665 ntBASIC9.71□□□□□ -0.85
Ubr4A2AN08 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ubr4A2AN08 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ubr4A2AN08 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ubr4A2AN08 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ubr4A2AN08 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Ubr4A2AN08 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ubr4A2AN08 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC9.71□□□□□ -0.86
Ubr4A2AN08 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC9.71□□□□□ -0.86
Ubr4A2AN08 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ubr4A2AN08 Gm23547-201ENSMUST00000158210 271 ntBASIC9.7□□□□□ -0.86
Ubr4A2AN08 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Gm14822-201ENSMUST00000122247 291 ntBASIC9.7□□□□□ -0.86
Ubr4A2AN08 Olfr129-201ENSMUST00000122318 993 ntBASIC9.7□□□□□ -0.86
Ubr4A2AN08 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.7□□□□□ -0.86
Ubr4A2AN08 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Gm1401-201ENSMUST00000122048 772 ntBASIC9.7□□□□□ -0.86
Ubr4A2AN08 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr4A2AN08 Gm12085-201ENSMUST00000119263 940 ntBASIC9.69□□□□□ -0.86
Ubr4A2AN08 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.69□□□□□ -0.86
Ubr4A2AN08 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Gm10138-203ENSMUST00000206952 366 ntBASIC9.69□□□□□ -0.86
Ubr4A2AN08 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Gm43403-201ENSMUST00000198011 1786 ntBASIC9.69□□□□□ -0.86
Ubr4A2AN08 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Gm11779-201ENSMUST00000118541 368 ntBASIC9.69□□□□□ -0.86
Ubr4A2AN08 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Cdkn3-203ENSMUST00000227149 1952 ntBASIC9.69□□□□□ -0.86
Ubr4A2AN08 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC9.69□□□□□ -0.86
Ubr4A2AN08 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.69□□□□□ -0.86
Ubr4A2AN08 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.69□□□□□ -0.86
Ubr4A2AN08 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.69□□□□□ -0.86
Ubr4A2AN08 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr4A2AN08 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 AC122428.2-201ENSMUST00000216321 1832 ntBASIC9.68□□□□□ -0.86
Ubr4A2AN08 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Gm38027-201ENSMUST00000192315 235 ntBASIC9.68□□□□□ -0.86
Ubr4A2AN08 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Gm38319-201ENSMUST00000194537 1266 ntBASIC9.68□□□□□ -0.86
Ubr4A2AN08 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms