Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
IsxA1A546 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IsxA1A546 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
IsxA1A546 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.95■□□□□ 0.3
IsxA1A546 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.95■□□□□ 0.3
IsxA1A546 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.95■□□□□ 0.3
IsxA1A546 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
IsxA1A546 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
IsxA1A546 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IsxA1A546 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.94■□□□□ 0.3
IsxA1A546 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
IsxA1A546 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.94■□□□□ 0.3
IsxA1A546 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IsxA1A546 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.93■□□□□ 0.3
IsxA1A546 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IsxA1A546 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IsxA1A546 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
IsxA1A546 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.93■□□□□ 0.3
IsxA1A546 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IsxA1A546 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IsxA1A546 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
IsxA1A546 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IsxA1A546 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
IsxA1A546 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IsxA1A546 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
IsxA1A546 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.92■□□□□ 0.3
IsxA1A546 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IsxA1A546 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IsxA1A546 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IsxA1A546 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IsxA1A546 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.92■□□□□ 0.3
IsxA1A546 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IsxA1A546 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IsxA1A546 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.92■□□□□ 0.3
IsxA1A546 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IsxA1A546 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.91■□□□□ 0.3
IsxA1A546 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.91■□□□□ 0.3
IsxA1A546 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
IsxA1A546 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
IsxA1A546 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
IsxA1A546 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IsxA1A546 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IsxA1A546 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IsxA1A546 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.9■□□□□ 0.3
IsxA1A546 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
IsxA1A546 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.9■□□□□ 0.3
IsxA1A546 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IsxA1A546 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IsxA1A546 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IsxA1A546 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
IsxA1A546 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IsxA1A546 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
IsxA1A546 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
IsxA1A546 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms