Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-1A0N8R0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.71□□□□□ -0.06
Trav12d-1A0N8R0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12d-1A0N8R0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Trav12d-1A0N8R0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Gm38205-201ENSMUST00000192243 258 ntBASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.7□□□□□ -0.06
Trav12d-1A0N8R0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Gm13241-201ENSMUST00000094493 780 ntBASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-1A0N8R0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Tgds-204ENSMUST00000228543 1594 ntBASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav12d-1A0N8R0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-1A0N8R0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms